RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ABCA4P78363 2273 aa12.64□□□□□ -0.39
ARHGEF40-203ENST00000554514 RANP62826 216 aaKnown RBP12.64□□□□□ -0.39
ARHGEF40-203ENST00000554514 PATE2Q6UY27 113 aa12.64□□□□□ -0.39
ARHGEF40-203ENST00000554514 Q6ZWC4 215 aa12.64□□□□□ -0.39
ARHGEF40-203ENST00000554514 CACNG8Q8WXS5 425 aa12.64□□□□□ -0.39
ARHGEF40-203ENST00000554514 FAM168AQ92567 244 aa12.64□□□□□ -0.39
ARHGEF40-203ENST00000554514 CHODLQ9H9P2 273 aa12.64□□□□□ -0.39
ARHGEF40-203ENST00000554514 IGLV2-8P01709 118 aa12.64□□□□□ -0.39
ARHGEF40-203ENST00000554514 TPPP2P59282 170 aa12.64□□□□□ -0.39
ARHGEF40-203ENST00000554514 VMA21Q3ZAQ7 101 aa12.64□□□□□ -0.39
ARHGEF40-203ENST00000554514 C16orf54Q6UWD8 224 aa12.64□□□□□ -0.39
ARHGEF40-203ENST00000554514 AMMECR1Q9Y4X0 333 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF40-203ENST00000554514 A0A1W2PRE2 83 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 VSTM5A8MXK1 200 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 IGHV1-8P0DP01 117 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 CDKN1AP38936 164 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 LINC00305Q7Z4B0 112 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 GSX1Q9H4S2 264 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 CSMD1Q96PZ7 3565 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 ZZEF1O43149 2961 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 PSMB11A5LHX3 300 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 COX7A1P24310 79 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 PPOXP50336 477 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 IGF2BP2-AS1Q96M15 143 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 NDUFAF3Q9BU61 184 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 C19orf24Q9BVV8 132 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 MRPL32Q9BYC8 188 aaKnown RBP12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 GNB4Q9HAV0 340 aa12.63□□□□□ -0.39
ARHGEF40-203ENST00000554514 IGKV1D-37A0A075B6S9 117 aa12.62□□□□□ -0.39
ARHGEF40-203ENST00000554514 IGHV1-69-2A0A0G2JMI3 117 aa12.62□□□□□ -0.39
ARHGEF40-203ENST00000554514 TCRBV4S1A1TA0A5B7 111 aa12.62□□□□□ -0.39
ARHGEF40-203ENST00000554514 SHISA9B4DS77 424 aa12.62□□□□□ -0.39
ARHGEF40-203ENST00000554514 ATP5IP56385 69 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF40-203ENST00000554514 SELENOTP62341 195 aa12.62□□□□□ -0.39
ARHGEF40-203ENST00000554514 TDRG1Q3Y452 100 aa12.62□□□□□ -0.39
ARHGEF40-203ENST00000554514 LEMD1Q68G75 181 aa12.62□□□□□ -0.39
ARHGEF40-203ENST00000554514 ST6GALNAC6Q969X2 333 aa12.62□□□□□ -0.39
ARHGEF40-203ENST00000554514 FOXC1Q12948 553 aa12.62□□□□□ -0.39
ARHGEF40-203ENST00000554514 ARL2-SNX15V9GYD0 113 aa12.62□□□□□ -0.39
ARHGEF40-203ENST00000554514 EREGO14944 169 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 PRB4P10163 310 aaPredicted RBP12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 CX3CL1P78423 397 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 LINC01560Q8TB33 94 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 OSTCQ9NRP0 149 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 TRAV9-1A0A075B6T8 112 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 PMCHP20382 165 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 TMEM155Q4W5P6 130 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 OR1L4Q8NGR5 311 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 VN1R17PQ8TDU5 208 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 IGFBPL1Q8WX77 278 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 TNFRSF19Q9NS68 423 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 C22orf46C9J442 243 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 ISLRO14498 428 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 PAX1P15863 534 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 DLX6P56179 175 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 ZNF329Q86UD4 541 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 PNKDQ8N490 385 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 TMEM133Q9H2Q1 129 aa12.61□□□□□ -0.39
ARHGEF40-203ENST00000554514 FAM87AP0C7U9 286 aa12.6□□□□□ -0.39
ARHGEF40-203ENST00000554514 SRIP30626 198 aa12.6□□□□□ -0.39
ARHGEF40-203ENST00000554514 TMEM136Q6ZRR5 245 aa12.6□□□□□ -0.39
ARHGEF40-203ENST00000554514 GNB1LQ9BYB4 327 aa12.6□□□□□ -0.39
ARHGEF40-203ENST00000554514 PEX7O00628 323 aa12.6□□□□□ -0.39
ARHGEF40-203ENST00000554514 TNFRSF13BO14836 293 aaPredicted RBP12.6□□□□□ -0.39
ARHGEF40-203ENST00000554514 MFAP2P55001 183 aa12.6□□□□□ -0.39
ARHGEF40-203ENST00000554514 KRTDAPP60985 99 aa12.6□□□□□ -0.39
ARHGEF40-203ENST00000554514 ASCL5Q7RTU5 278 aa12.6□□□□□ -0.39
ARHGEF40-203ENST00000554514 OR4A5Q8NH83 315 aa12.6□□□□□ -0.39
ARHGEF40-203ENST00000554514 RCHY1Q96PM5 261 aa12.6□□□□□ -0.39
ARHGEF40-203ENST00000554514 PAM16Q9Y3D7 125 aa12.6□□□□□ -0.39
ARHGEF40-203ENST00000554514 TOX4O94842 621 aa12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 ATG101Q9BSB4 218 aa12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 RNF114Q9Y508 228 aa12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 DCHS2Q6V1P9 2916 aa12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 FAM90A27PA6NNH2 459 aa12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 ZNF253O75346 499 aa12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 SLC25A5P05141 298 aaKnown RBP12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 TAS2R60P59551 318 aa12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 C11orf42Q8N5U0 333 aa12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 SIGLECL1Q8N7X8 197 aa12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 FXYD5Q96DB9 178 aa12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 RNF2Q99496 336 aa12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 JKAMPQ9P055 326 aa12.59□□□□□ -0.39
ARHGEF40-203ENST00000554514 IGLC7A0M8Q6 106 aa12.58□□□□□ -0.39
ARHGEF40-203ENST00000554514 RPL27AP46776 148 aaKnown RBP12.58□□□□□ -0.39
ARHGEF40-203ENST00000554514 MRGPRG-AS1Q2M3A8 158 aa12.58□□□□□ -0.39
ARHGEF40-203ENST00000554514 ZNF705AQ6ZN79 300 aaPredicted RBP12.58□□□□□ -0.39
ARHGEF40-203ENST00000554514 LINC00311Q8N616 119 aa12.58□□□□□ -0.39
ARHGEF40-203ENST00000554514 NGBQ9NPG2 151 aa12.58□□□□□ -0.39
ARHGEF40-203ENST00000554514 CDC42EP3Q9UKI2 254 aa12.58□□□□□ -0.39
ARHGEF40-203ENST00000554514 INSIG2Q9Y5U4 225 aa12.58□□□□□ -0.39
ARHGEF40-203ENST00000554514 IGHV2-26A0A0B4J1V2 119 aa12.58□□□□□ -0.4
ARHGEF40-203ENST00000554514 CORTO00230 105 aa12.58□□□□□ -0.4
ARHGEF40-203ENST00000554514 TCAPO15273 167 aa12.58□□□□□ -0.4
ARHGEF40-203ENST00000554514 AMY1AP04745 511 aa12.58□□□□□ -0.4
ARHGEF40-203ENST00000554514 MC5RP33032 325 aa12.58□□□□□ -0.4
ARHGEF40-203ENST00000554514 PAFAH1B2P68402 229 aa12.58□□□□□ -0.4
ARHGEF40-203ENST00000554514 RPL19P84098 196 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms