RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 OR8B3Q8NGG8 313 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 OR5AN1Q8NGI8 311 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 FAM216AQ8WUB2 273 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 ST6GALNAC6Q969X2 333 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 OR8B2Q96RD0 313 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 PLEKHA3Q9HB20 300 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 FBXL7Q9UJT9 491 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 SERF1AO75920 110 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 REG1AP05451 166 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 TMEM11P17152 192 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 CD24P25063 80 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 CDC34P49427 236 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-212ENST00000554467 MIC13Q5XKP0 118 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 C19orf35Q6ZS72 473 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 OR52E5Q8NH55 327 aa9.43□□□□□ -0.9
SHMT2-212ENST00000554467 ATP5G3P48201 142 aa9.42□□□□□ -0.9
SHMT2-212ENST00000554467 TMEM30BQ3MIR4 351 aa9.42□□□□□ -0.9
SHMT2-212ENST00000554467 PDLIM3Q53GG5 364 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-212ENST00000554467 Q8N7P7 452 aa9.42□□□□□ -0.9
SHMT2-212ENST00000554467 ANAPC16Q96DE5 110 aa9.42□□□□□ -0.9
SHMT2-212ENST00000554467 SLC45A2Q9UMX9 530 aa9.42□□□□□ -0.9
SHMT2-212ENST00000554467 ABCA12Q86UK0 2595 aa9.42□□□□□ -0.9
SHMT2-212ENST00000554467 CTXND1A0A1B0GTU2 59 aa9.42□□□□□ -0.9
SHMT2-212ENST00000554467 HYPMO75409 117 aa9.42□□□□□ -0.9
SHMT2-212ENST00000554467 PPBPP02775 128 aa9.42□□□□□ -0.9
SHMT2-212ENST00000554467 MAJINQ3KP22 176 aa9.42□□□□□ -0.9
SHMT2-212ENST00000554467 MGST2Q99735 147 aa9.42□□□□□ -0.9
SHMT2-212ENST00000554467 USP9YO00507 2555 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-212ENST00000554467 PRSS46E5RG02 174 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 NDUFB4O95168 129 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 FRMD6-AS1P0C7T7 363 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 LDLRAD2Q5SZI1 272 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 LINC01551Q86U37 167 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 NEIL1Q96FI4 390 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-212ENST00000554467 C1orf159Q96HA4 380 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 PRNDQ9UKY0 176 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 LAMTOR2Q9Y2Q5 125 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 A0A1W2PN81 502 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 RANP62826 216 aaKnown RBP9.41□□□□□ -0.9
SHMT2-212ENST00000554467 RAB1CQ92928 201 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 TMEM186Q96B77 213 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 COMMD5Q9GZQ3 224 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 ZNF430Q9H8G1 570 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-212ENST00000554467 WDR83OSQ9Y284 106 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 COX11Q9Y6N1 276 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 ACTL6BO94805 426 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 GATA2P23769 480 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-212ENST00000554467 RPL8P62917 257 aaKnown RBP9.41□□□□□ -0.9
SHMT2-212ENST00000554467 LCN2P80188 198 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 VWC2Q2TAL6 325 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 ZNF114Q8NC26 417 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 OR4C13Q8NGP0 309 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 TIMD4Q96H15 378 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 RNF24Q9Y225 148 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 WASHC3Q9Y3C0 194 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 HILPDAQ9Y5L2 63 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 ZANQ9Y493 2812 aa9.41□□□□□ -0.9
SHMT2-212ENST00000554467 CBY3A6NI87 242 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 IGLC2P0DOY2 106 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 IGLC3P0DOY3 106 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 ESDP10768 282 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 LGALS4P56470 323 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 GNB1P62873 340 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 PRCDQ00LT1 54 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 POU2AF1Q16633 256 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 NUDT10Q8NFP7 164 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 OSR1Q8TAX0 266 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-212ENST00000554467 IGLV2-23P01705 113 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 HLA-DRB5Q30154 266 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 SPATA45Q537H7 98 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 INSIG2Q9Y5U4 225 aa9.4□□□□□ -0.9
SHMT2-212ENST00000554467 TRAV34A0A0B4J273 112 aa9.4□□□□□ -0.91
SHMT2-212ENST00000554467 IGHV2-70DA0A0C4DH43 119 aa9.4□□□□□ -0.91
SHMT2-212ENST00000554467 C17orf112F2Z3M2 114 aa9.4□□□□□ -0.91
SHMT2-212ENST00000554467 IGFBP2P18065 325 aa9.4□□□□□ -0.91
SHMT2-212ENST00000554467 TPPP2P59282 170 aa9.4□□□□□ -0.91
SHMT2-212ENST00000554467 TMEM177Q53S58 311 aa9.4□□□□□ -0.91
SHMT2-212ENST00000554467 ERASQ7Z444 233 aa9.4□□□□□ -0.91
SHMT2-212ENST00000554467 CLEC7AQ9BXN2 247 aa9.4□□□□□ -0.91
SHMT2-212ENST00000554467 BET1LQ9NYM9 111 aa9.4□□□□□ -0.91
SHMT2-212ENST00000554467 TMEM250H0YL14 139 aa9.39□□□□□ -0.91
SHMT2-212ENST00000554467 IGLV1-47P01700 117 aa9.39□□□□□ -0.91
SHMT2-212ENST00000554467 HINT1P49773 126 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-212ENST00000554467 PAFAH1B2P68402 229 aa9.39□□□□□ -0.91
SHMT2-212ENST00000554467 LINC00311Q8N616 119 aa9.39□□□□□ -0.91
SHMT2-212ENST00000554467 GGTLC1Q9BX51 225 aa9.39□□□□□ -0.91
SHMT2-212ENST00000554467 TIMM9Q9Y5J7 89 aa9.39□□□□□ -0.91
SHMT2-212ENST00000554467 BUB1B-PAK6H3BSN5 160 aa9.39□□□□□ -0.91
SHMT2-212ENST00000554467 LHFPL4Q7Z7J7 247 aa9.39□□□□□ -0.91
SHMT2-212ENST00000554467 OR5AU1Q8NGC0 362 aa9.39□□□□□ -0.91
SHMT2-212ENST00000554467 OR4P4Q8NGL7 312 aa9.39□□□□□ -0.91
SHMT2-212ENST00000554467 IGHV3-21A0A0B4J1V1 117 aa9.38□□□□□ -0.91
SHMT2-212ENST00000554467 IGHV1-3A0A0C4DH29 117 aa9.38□□□□□ -0.91
SHMT2-212ENST00000554467 CGB1A6NKQ9 187 aa9.38□□□□□ -0.91
SHMT2-212ENST00000554467 SPINK4O60575 86 aa9.38□□□□□ -0.91
SHMT2-212ENST00000554467 LIPFP07098 398 aa9.38□□□□□ -0.91
SHMT2-212ENST00000554467 ARL14EPLP0DKL9 152 aa9.38□□□□□ -0.91
SHMT2-212ENST00000554467 CBLN1P23435 193 aa9.38□□□□□ -0.91
SHMT2-212ENST00000554467 ZFP36P26651 326 aaKnown RBP9.38□□□□□ -0.91
SHMT2-212ENST00000554467 YPEL3P61236 119 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms