RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 OR8D2Q9GZM6 311 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 OTORQ9NRC9 128 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 CALML5Q9NZT1 146 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 NAT8BQ9UHF3 227 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 MYH2Q9UKX2 1941 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 KIAA1671Q9BY89 1806 aa2.67□□□□□ -1.98
SCFD1-211ENST00000554437 CAMSAP2Q08AD1 1489 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 BRWD3Q6RI45 1802 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 ATAD5Q96QE3 1844 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.66□□□□□ -1.98
SCFD1-211ENST00000554437 IGKV1D-37A0A075B6S9 117 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 A0A1B0GW64 132 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 TMEM212A6NML5 194 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 C19orf84I3L1E1 186 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 TMEM256-PLSCR3K7ERE1 68 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 CST7O76096 145 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 UCHL1P09936 223 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 NDUFA6P56556 154 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 UBE2BP63146 152 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 ZNF141Q15928 474 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 TMEM69Q5SWH9 247 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 MIR17HGQ75NE6 70 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 HIST3H2BBQ8N257 126 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 WFDC5Q8TCV5 224 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 KLF14Q8TD94 323 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-211ENST00000554437 YPEL2Q96QA6 119 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 SCGB3A1Q96QR1 104 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 TCEAL2Q9H3H9 227 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-211ENST00000554437 OSTCQ9NRP0 149 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 RBM7Q9Y580 266 aaKnown RBP2.66□□□□□ -1.98
SCFD1-211ENST00000554437 REREQ9P2R6 1566 aa2.66□□□□□ -1.98
SCFD1-211ENST00000554437 IGKV1-9A0A0C4DH69 117 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 ODAMA1E959 279 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 J3QQQ9 107 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 SOD1P00441 154 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 CCL5P13501 91 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 S100PP25815 95 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 SDC2P34741 201 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 RRAS2P62070 204 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-211ENST00000554437 VMA21Q3ZAQ7 101 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 PRR9Q5T870 116 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 AP1S3Q96PC3 154 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 LXNQ9BS40 222 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 C16orf95Q9H693 158 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 ASF1BQ9NVP2 202 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 ZNF443Q9Y2A4 671 aaPredicted RBP2.65□□□□□ -1.99
SCFD1-211ENST00000554437 RALGAPA2Q2PPJ7 1873 aa2.65□□□□□ -1.99
SCFD1-211ENST00000554437 TRIP11Q15643 1979 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 MEIKINA0A087WXM9 373 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 IGHV3-15A0A0B4J1V0 119 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 A0A0J9YW62 118 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 MDFIC2A0A1B0GVS7 189 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 C16orf90A8MZG2 172 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 NAPSAO96009 420 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 P0DMU3 169 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 FAM231AP0DMU4 169 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 FAM231CP0DMU5 169 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 XCL1P47992 114 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 TMBIM6P55061 237 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 RHOGP84095 191 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 ZNF117Q03924 483 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 BIKQ13323 160 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 KISS1Q15726 138 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 MSMO1Q15800 293 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 FAM229BQ4G0N7 80 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 C2orf91Q6ZV80 131 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 SLC30A7Q8NEW0 376 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 OR10P1Q8NGE3 313 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 OR51A4Q8NGJ6 313 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 HIST1H2BLQ99880 126 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 GINS4Q9BRT9 223 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 PRADC1Q9BSG0 188 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 MRPL32Q9BYC8 188 aaKnown RBP2.64□□□□□ -1.99
SCFD1-211ENST00000554437 NAT8Q9UHE5 227 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 RNF11Q9Y3C5 154 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 S4R3C0 116 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 YEATS2Q9ULM3 1422 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 TICRRQ7Z2Z1 1910 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 DSCAML1Q8TD84 2053 aa2.64□□□□□ -1.99
SCFD1-211ENST00000554437 OTOFQ9HC10 1997 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 TAF1LQ8IZX4 1826 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 TRGV10A0A0A0MS01 117 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 A0A1W2PQD3 144 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 C17orf98A8MV24 154 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 J3QR89 54 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 CREBL2O60519 120 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-211ENST00000554437 IGKV1-16P04430 117 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 CXCL1P09341 107 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 FABP2P12104 132 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 CD24P25063 80 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 RNASE4P34096 147 aaKnown RBP2.63□□□□□ -1.99
SCFD1-211ENST00000554437 DYNLT3P51808 116 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 NCS1P62166 190 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-211ENST00000554437 NOXRED1Q6NXP6 359 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 C22orf39Q6P5X5 142 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 MSRB3Q8IXL7 192 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 OR4K15Q8NH41 348 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 TMEM203Q969S6 136 aa2.63□□□□□ -1.99
SCFD1-211ENST00000554437 ZC2HC1AQ96GY0 325 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms