RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 HINT2Q9BX68 163 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 ARV1Q9H2C2 271 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 DMRT1Q9Y5R6 373 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 F11RQ9Y624 299 aaKnown RBP9.95□□□□□ -0.82
SHMT2-211ENST00000554310 LGALS9O00182 355 aa9.94□□□□□ -0.82
SHMT2-211ENST00000554310 IGHV3-23P01764 117 aa9.94□□□□□ -0.82
SHMT2-211ENST00000554310 CSN3P07498 182 aa9.94□□□□□ -0.82
SHMT2-211ENST00000554310 AKR1C2P52895 323 aa9.94□□□□□ -0.82
SHMT2-211ENST00000554310 RPL7L1Q6DKI1 246 aaKnown RBP9.94□□□□□ -0.82
SHMT2-211ENST00000554310 LCN12Q6JVE5 192 aa9.94□□□□□ -0.82
SHMT2-211ENST00000554310 OR2C3Q8N628 320 aa9.94□□□□□ -0.82
SHMT2-211ENST00000554310 UBAC2Q8NBM4 344 aa9.94□□□□□ -0.82
SHMT2-211ENST00000554310 OR2K2Q8NGT1 345 aa9.94□□□□□ -0.82
SHMT2-211ENST00000554310 ZNF502Q8TBZ5 544 aa9.94□□□□□ -0.82
SHMT2-211ENST00000554310 VN1R17PQ8TDU5 208 aa9.94□□□□□ -0.82
SHMT2-211ENST00000554310 SLC25A31Q9H0C2 315 aa9.94□□□□□ -0.82
SHMT2-211ENST00000554310 S4R3C0 116 aa9.94□□□□□ -0.82
SHMT2-211ENST00000554310 DNAH9Q9NYC9 4486 aa9.93□□□□□ -0.82
SHMT2-211ENST00000554310 BORCS7-ASMTA0A0B4J1R7 106 aa9.93□□□□□ -0.82
SHMT2-211ENST00000554310 A0A0G2JRQ6 117 aa9.93□□□□□ -0.82
SHMT2-211ENST00000554310 A8MWP6 167 aa9.93□□□□□ -0.82
SHMT2-211ENST00000554310 NHLRC4P0CG21 123 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-211ENST00000554310 POLR2GP62487 172 aaKnown RBP eCLIP9.93□□□□□ -0.82
SHMT2-211ENST00000554310 VAMP2P63027 116 aa9.93□□□□□ -0.82
SHMT2-211ENST00000554310 PRCDQ00LT1 54 aa9.93□□□□□ -0.82
SHMT2-211ENST00000554310 GPHB5Q86YW7 130 aa9.93□□□□□ -0.82
SHMT2-211ENST00000554310 RNASE11Q8TAA1 199 aaKnown RBP9.93□□□□□ -0.82
SHMT2-211ENST00000554310 TMED6Q8WW62 240 aa9.93□□□□□ -0.82
SHMT2-211ENST00000554310 SAT2Q96F10 170 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-211ENST00000554310 ATP6V0BQ99437 205 aa9.93□□□□□ -0.82
SHMT2-211ENST00000554310 LYRM2Q9NU23 88 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-211ENST00000554310 TENM3Q9P273 2699 aa9.93□□□□□ -0.82
SHMT2-211ENST00000554310 FAM90A26D6RGX4 464 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 WRBO00258 174 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 OR2C1O95371 312 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 IGKV1-5P01602 117 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 P0C879 139 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 GPR183P32249 361 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 EWSR1Q01844 656 aaKnown RBP eCLIP9.92□□□□□ -0.82
SHMT2-211ENST00000554310 BAXQ07812 192 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 FAM106AQ4KMX7 169 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 SLC25A24Q6NUK1 477 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 ZNF114Q8NC26 417 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 OR1P1Q8NH06 330 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 DYNLRB2Q8TF09 96 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 RAB40CQ96S21 281 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 PLEKHA3Q9HB20 300 aa9.92□□□□□ -0.82
SHMT2-211ENST00000554310 IGSF23A1L1A6 192 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 FAM24AA6NFZ4 105 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 C2orf70A6NJV1 201 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 KRBOX1C9JBD0 128 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 SSSCA1O60232 199 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 CLEC3BP05452 202 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 SEC11BP0C7V7 166 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 SULT1A2P50226 295 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 MFAP2P55001 183 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 HSPE1P61604 102 aaKnown RBP9.91□□□□□ -0.82
SHMT2-211ENST00000554310 TMEM252Q8N6L7 170 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 BSCL2Q96G97 398 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-211ENST00000554310 GINS3Q9BRX5 216 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 SMIM3Q9BZL3 60 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 CACNG5Q9UF02 275 aa9.91□□□□□ -0.82
SHMT2-211ENST00000554310 RAB19A4D1S5 217 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 TGOLN2O43493 480 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 FOLR2P14207 255 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 CAV2P51636 162 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 PAX9P55771 341 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 TAS2R30P59541 319 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 NHLH2Q02577 135 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 UQCC3Q6UW78 93 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 ADAMTSL5Q6ZMM2 481 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 Q6ZRM9 215 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 GTSCR1Q86UQ5 136 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 CCDC28AQ8IWP9 274 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 SMIM8Q96KF7 97 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 MAGT1Q9H0U3 335 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 WFDC1Q9HC57 220 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 GAR1Q9NY12 217 aaKnown RBP9.9□□□□□ -0.82
SHMT2-211ENST00000554310 C21orf62Q9NYP8 219 aa9.9□□□□□ -0.82
SHMT2-211ENST00000554310 TECRQ9NZ01 308 aaKnown RBP9.9□□□□□ -0.82
SHMT2-211ENST00000554310 ZNF320A2RRD8 509 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 TMEM213A2RRL7 107 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 INS-IGF2F8WCM5 200 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 K7EIM0 57 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 SYNGR2O43760 224 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 FRMD6-AS1P0C7T7 363 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 BLOC1S1P78537 153 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 ERHP84090 104 aaKnown RBP9.89□□□□□ -0.83
SHMT2-211ENST00000554310 ZNF266Q14584 549 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 IZUMO4Q1ZYL8 232 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 CD300EQ496F6 205 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-211ENST00000554310 SPSB3Q6PJ21 355 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 OR1S2Q8NGQ3 325 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 TMEM190Q8WZ59 177 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 MARC2Q969Z3 335 aa9.89□□□□□ -0.83
SHMT2-211ENST00000554310 OR2T8A6NH00 312 aa9.88□□□□□ -0.83
SHMT2-211ENST00000554310 ZNF705EA8MWA4 302 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-211ENST00000554310 A8MZ25 164 aa9.88□□□□□ -0.83
SHMT2-211ENST00000554310 MED6O75586 246 aa9.88□□□□□ -0.83
SHMT2-211ENST00000554310 TMEM50AO95807 157 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms