RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 FAM90A2PQ658T7 463 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 MAPK1IP1LQ8NDC0 245 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 SLC35E1Q96K37 410 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 PACRGQ96M98 296 aaPredicted RBP10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 IGKV1D-37A0A075B6S9 117 aa10.12□□□□□ -0.79
VIPAS39-206ENST00000553888 SH2D7A6NKC9 451 aaPredicted RBP10.12□□□□□ -0.79
VIPAS39-206ENST00000553888 SMIM6P0DI80 62 aa10.12□□□□□ -0.79
VIPAS39-206ENST00000553888 UBE2E1P51965 193 aa10.12□□□□□ -0.79
VIPAS39-206ENST00000553888 C22orf15Q8WYQ4 148 aa10.12□□□□□ -0.79
VIPAS39-206ENST00000553888 VAX2Q9UIW0 290 aa10.12□□□□□ -0.79
VIPAS39-206ENST00000553888 C7orf77A4D0Y5 90 aa10.12□□□□□ -0.79
VIPAS39-206ENST00000553888 H3BQ15 152 aa10.12□□□□□ -0.79
VIPAS39-206ENST00000553888 MORN5Q5VZ52 161 aa10.12□□□□□ -0.79
VIPAS39-206ENST00000553888 OR2T10Q8NGZ9 312 aa10.12□□□□□ -0.79
VIPAS39-206ENST00000553888 S4R3C0 116 aa10.12□□□□□ -0.79
VIPAS39-206ENST00000553888 NDUFA3O95167 84 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 ATP5G3P48201 142 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 SUB1P53999 127 aaKnown RBP eCLIP10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 RAB31Q13636 194 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 FXYD3Q14802 87 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 C5orf64Q2M2E5 130 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 FAM78BQ5VT40 261 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 HIST2H2BCQ6DN03 193 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 SLC35E3Q7Z769 313 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 NPBQ8NG41 125 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 TRAV40A0A0B4J280 105 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 FNDC10F2Z333 226 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 RBX1P62877 108 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 MEF2BQ02080 365 aaPredicted RBP10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 MINOS1Q5TGZ0 78 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 OR4F5Q8NH21 305 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 RNASEH2CQ8TDP1 164 aaKnown RBP10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 ISOC2Q96AB3 205 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 OR4F4Q96R69 305 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 RNF5Q99942 180 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 MINOS1-NBL1R4GNA1 71 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 APCP25054 2843 aa10.11□□□□□ -0.79
VIPAS39-206ENST00000553888 NPFFO15130 113 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 MAS1LP35410 378 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 SPNS3Q6ZMD2 512 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 Q8N6K4 173 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 OR51G1Q8NGK1 321 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 TMEM37Q8WXS4 190 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 WNT10AQ9GZT5 417 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 F11RQ9Y624 299 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 MT-CO2P00403 227 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 STAG3L2P0CL84 134 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 ATP5IP56385 69 aaPredicted RBP10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 PAX8Q06710 450 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 CCDC144NLQ6NUI1 221 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 CYP2G1PQ6ZSU1 146 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 CACNG8Q8WXS5 425 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 RPUSD4Q96CM3 377 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 UHRF2Q96PU4 802 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 CITED1Q99966 193 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 SMDT1Q9H4I9 107 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 TRAV5A0A0B4J249 113 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 ZNF727A8MUV8 499 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 IFNA1P01562 189 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 SNRPCP09234 159 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 IGHV4-38-2P0DP08 117 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 PSMB3P49720 205 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 CX3CL1P78423 397 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 CST9LP1Q5W188 147 aa10.1□□□□□ -0.79
VIPAS39-206ENST00000553888 ASPHD1Q5U4P2 390 aa10.09□□□□□ -0.79
VIPAS39-206ENST00000553888 RBMS3Q6XE24 437 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-206ENST00000553888 ZNF114Q8NC26 417 aa10.09□□□□□ -0.79
VIPAS39-206ENST00000553888 OR1P1Q8NH06 330 aa10.09□□□□□ -0.79
VIPAS39-206ENST00000553888 BIN3Q9NQY0 253 aa10.09□□□□□ -0.79
VIPAS39-206ENST00000553888 NPPCP23582 126 aa10.09□□□□□ -0.79
VIPAS39-206ENST00000553888 TMEM219Q86XT9 240 aa10.09□□□□□ -0.79
VIPAS39-206ENST00000553888 NUDT10Q8NFP7 164 aa10.09□□□□□ -0.79
VIPAS39-206ENST00000553888 MALSU1Q96EH3 234 aa10.09□□□□□ -0.79
VIPAS39-206ENST00000553888 SPXQ9BT56 116 aa10.09□□□□□ -0.79
VIPAS39-206ENST00000553888 TBL2Q9Y4P3 447 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-206ENST00000553888 RHOBP62745 196 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 CLEC12BQ2HXU8 276 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 ZNF503Q96F45 646 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 HSPB9Q9BQS6 159 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 KCNIP2Q9NS61 270 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 POLR3KQ9Y2Y1 108 aaPredicted RBP10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 YTHDF2Q9Y5A9 579 aaKnown RBP10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 C11orf94C9JXX5 98 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 AVPP01185 164 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 CRYGCP07315 174 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 OR10J4P0C629 311 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 PVRIGQ6DKI7 326 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 NAV2Q8IVL1 2488 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 Q8N9W7 124 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 DERL1Q9BUN8 251 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 CR1P17927 2039 aa10.08□□□□□ -0.8
VIPAS39-206ENST00000553888 PSMB11A5LHX3 300 aa10.07□□□□□ -0.8
VIPAS39-206ENST00000553888 GCHFRP30047 84 aa10.07□□□□□ -0.8
VIPAS39-206ENST00000553888 PATE2Q6UY27 113 aa10.07□□□□□ -0.8
VIPAS39-206ENST00000553888 OR5T1Q8NG75 326 aa10.07□□□□□ -0.8
VIPAS39-206ENST00000553888 MANBALQ9NQG1 85 aa10.07□□□□□ -0.8
VIPAS39-206ENST00000553888 TCRBV4S1A1TA0A5B7 111 aa10.07□□□□□ -0.8
VIPAS39-206ENST00000553888 LINC01548A6NM66 108 aa10.07□□□□□ -0.8
VIPAS39-206ENST00000553888 OOSP1A8MZH6 123 aa10.07□□□□□ -0.8
VIPAS39-206ENST00000553888 CXorf1O96002 111 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms