RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 RNF141Q8WVD5 230 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 ACY3Q96HD9 319 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 ZNF355PQ9NSJ1 428 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 KLK9Q9UKQ9 250 aa11.29□□□□□ -0.6
SHMT2-208ENST00000553868 LINC01548A6NM66 108 aa11.28□□□□□ -0.6
SHMT2-208ENST00000553868 BRI3O95415 125 aa11.28□□□□□ -0.6
SHMT2-208ENST00000553868 RUNX1Q01196 453 aa11.28□□□□□ -0.6
SHMT2-208ENST00000553868 AKR1C8PQ5T2L2 129 aa11.28□□□□□ -0.6
SHMT2-208ENST00000553868 ACSM6Q6P461 480 aa11.28□□□□□ -0.6
SHMT2-208ENST00000553868 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-208ENST00000553868 NPCDR1Q9BY65 106 aa11.28□□□□□ -0.6
SHMT2-208ENST00000553868 FNDC4Q9H6D8 234 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-208ENST00000553868 LYSTQ99698 3801 aa11.27□□□□□ -0.6
SHMT2-208ENST00000553868 G3V318 75 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 I3L2K1 104 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 MBP02144 154 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 FABP1P07148 127 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 NPBWR1P48145 328 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 CAMLGP49069 296 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 SULT1A2P50226 295 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 RND2P52198 227 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 C19orf54Q5BKX5 351 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 C19orf35Q6ZS72 473 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 NECAP1Q8NC96 275 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 TMEM116Q8NCL8 245 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 OR4X1Q8NH49 305 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 VN1R17PQ8TDU5 208 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 CXorf58Q96LI9 332 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 FANCD2OSQ96PS1 177 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 RSG1Q9BU20 258 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 SH3BGRL3Q9H299 93 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 FBXL7Q9UJT9 491 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 LSM4Q9Y4Z0 139 aaKnown RBP11.27□□□□□ -0.61
SHMT2-208ENST00000553868 DMRT1Q9Y5R6 373 aa11.27□□□□□ -0.61
SHMT2-208ENST00000553868 FAM223BA6NKX1 122 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 K7EIL1 84 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 K7EIM0 57 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 PRH1P02810 166 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 MFAP4P55083 255 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 SELENOTP62341 195 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 SLC35B1P78383 322 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 DPPA3Q6W0C5 159 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 TMEM182Q6ZP80 229 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-208ENST00000553868 FAM223AQ8IWN6 122 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 THAP8Q8NA92 274 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 OR2T6Q8NHC8 308 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 NPIPB3Q92617 1050 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 GGTLC1Q9BX51 225 aa11.26□□□□□ -0.61
SHMT2-208ENST00000553868 TRAV30A0A087WSZ9 112 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 TRBV9A0A0B4J1U6 114 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 ZFP92A6NM28 416 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 AGPAT2O15120 278 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 OR2J3O76001 311 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 RPL29P47914 159 aaKnown RBP11.25□□□□□ -0.61
SHMT2-208ENST00000553868 BLOC1S1P78537 153 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 RHOGP84095 191 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 MLANAQ16655 118 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 CLLU1Q5K131 121 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 FAM74A1Q5RGS3 127 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 Q8N2B8 174 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 SAT2Q96F10 170 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-208ENST00000553868 MGST2Q99735 147 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 TXN2Q99757 166 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 ZNF702PQ9H963 129 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 C21orf62Q9NYP8 219 aa11.25□□□□□ -0.61
SHMT2-208ENST00000553868 CSMD3Q7Z407 3707 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 ZNF705EA8MWA4 302 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-208ENST00000553868 NDUFB8O95169 186 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 PPIFP30405 207 aaKnown RBP11.24□□□□□ -0.61
SHMT2-208ENST00000553868 OR10J1P30954 320 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 ACOT6Q3I5F7 207 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-208ENST00000553868 FFAR4Q5NUL3 377 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 CYP2G1PQ6ZSU1 146 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 Q6ZSV7 163 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 C11orf44Q8N8P7 122 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 EEF1AKMT3Q96AZ1 226 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 USMG5Q96IX5 58 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 NOL4LQ96MY1 436 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-208ENST00000553868 ATP6V0BQ99437 205 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 TRGV9Q99603 122 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 LINC00527Q9UJ94 153 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 PXMP4Q9Y6I8 212 aa11.24□□□□□ -0.61
SHMT2-208ENST00000553868 TRBV7-1A0A0A6YYK4 115 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 IGHV3-21A0A0B4J1V1 117 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 A0A0G2JLM5 398 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 TCRBV4S1A1TA0A5B7 111 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 CLN5O75503 358 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 IGHV3-48P01763 117 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 TRGV3P03979 118 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 FCGR2BP31994 310 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-208ENST00000553868 ELLP55199 621 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-208ENST00000553868 ATP5G2Q06055 141 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 NDUFA5Q16718 116 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 C15orf32Q32M92 178 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 Q56UQ5 140 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 TMEM41BQ5BJD5 291 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 DEFB121Q5J5C9 76 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 Q6ZS46 218 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 SLC45A2Q9UMX9 530 aa11.23□□□□□ -0.61
SHMT2-208ENST00000553868 GNG7O60262 68 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms