RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 ZNF705AQ6ZN79 300 aaPredicted RBP12.67□□□□□ -0.38
SYNE2-211ENST00000553801 Q6ZRM9 215 aa12.67□□□□□ -0.38
SYNE2-211ENST00000553801 NRN1Q9NPD7 142 aa12.67□□□□□ -0.38
SYNE2-211ENST00000553801 ABCA13Q86UQ4 5058 aa12.66□□□□□ -0.38
SYNE2-211ENST00000553801 EMP1P54849 157 aa12.66□□□□□ -0.38
SYNE2-211ENST00000553801 YPEL3P61236 119 aaPredicted RBP12.66□□□□□ -0.38
SYNE2-211ENST00000553801 NEDD8Q15843 81 aa12.66□□□□□ -0.38
SYNE2-211ENST00000553801 ZNF575Q86XF7 245 aa12.66□□□□□ -0.38
SYNE2-211ENST00000553801 RRNAD1Q96FB5 475 aaKnown RBP12.66□□□□□ -0.38
SYNE2-211ENST00000553801 ZNF705FA8MVS1 300 aaPredicted RBP12.65□□□□□ -0.38
SYNE2-211ENST00000553801 GSTZ1O43708 216 aaPredicted RBP12.65□□□□□ -0.38
SYNE2-211ENST00000553801 IGLC1P0CG04 106 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 ZNF705DP0CH99 300 aaPredicted RBP12.65□□□□□ -0.38
SYNE2-211ENST00000553801 ZNF705BP0CI00 300 aaPredicted RBP12.65□□□□□ -0.38
SYNE2-211ENST00000553801 SLC25A4P12235 298 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 HLA-DRB4P13762 266 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 RPS19P39019 145 aaKnown RBP12.65□□□□□ -0.38
SYNE2-211ENST00000553801 HTR2BP41595 481 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 PIGPP57054 158 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 DHODHQ02127 395 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 TRIM16LQ309B1 348 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 BSXQ3C1V8 233 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 C1orf134Q5TEV5 83 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 RNASE11Q8TAA1 199 aaKnown RBP12.65□□□□□ -0.38
SYNE2-211ENST00000553801 TP53RKQ96S44 253 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 KRTAP4-5Q9BYR2 181 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 RFNGQ9Y644 331 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 HLA-DRB4X5D2U9 266 aa12.65□□□□□ -0.38
SYNE2-211ENST00000553801 C3orf85A0A1B0GTC6 90 aa12.64□□□□□ -0.39
SYNE2-211ENST00000553801 OR10J1P30954 320 aa12.64□□□□□ -0.39
SYNE2-211ENST00000553801 NKX2-1P43699 371 aaPredicted RBP12.64□□□□□ -0.39
SYNE2-211ENST00000553801 SPCS3P61009 180 aa12.64□□□□□ -0.39
SYNE2-211ENST00000553801 SIGLEC15Q6ZMC9 328 aa12.64□□□□□ -0.39
SYNE2-211ENST00000553801 SNX29P2Q8IUI4 249 aa12.64□□□□□ -0.39
SYNE2-211ENST00000553801 NIPSNAP3BQ9BS92 247 aa12.64□□□□□ -0.39
SYNE2-211ENST00000553801 PLA2G2EQ9NZK7 142 aa12.64□□□□□ -0.39
SYNE2-211ENST00000553801 IGHV3OR16-12A0A075B7B8 117 aa12.63□□□□□ -0.39
SYNE2-211ENST00000553801 M0QYG6 137 aa12.63□□□□□ -0.39
SYNE2-211ENST00000553801 IL4P05112 153 aa12.63□□□□□ -0.39
SYNE2-211ENST00000553801 PI3P19957 117 aa12.63□□□□□ -0.39
SYNE2-211ENST00000553801 TGFBR1P36897 503 aa12.63□□□□□ -0.39
SYNE2-211ENST00000553801 RND2P52198 227 aa12.63□□□□□ -0.39
SYNE2-211ENST00000553801 PRSS54Q6PEW0 395 aa12.63□□□□□ -0.39
SYNE2-211ENST00000553801 RNASEH2CQ8TDP1 164 aaKnown RBP12.63□□□□□ -0.39
SYNE2-211ENST00000553801 COPZ2Q9P299 210 aa12.63□□□□□ -0.39
SYNE2-211ENST00000553801 DKK2Q9UBU2 259 aa12.63□□□□□ -0.39
SYNE2-211ENST00000553801 BUB3O43684 328 aa12.62□□□□□ -0.39
SYNE2-211ENST00000553801 APOA1P02647 267 aa12.62□□□□□ -0.39
SYNE2-211ENST00000553801 OXA1LQ15070 435 aa12.62□□□□□ -0.39
SYNE2-211ENST00000553801 USF2Q15853 346 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-211ENST00000553801 ETFRF1Q6IPR1 90 aa12.62□□□□□ -0.39
SYNE2-211ENST00000553801 CCDC71LQ8N9Z2 235 aa12.62□□□□□ -0.39
SYNE2-211ENST00000553801 OR52E5Q8NH55 327 aa12.62□□□□□ -0.39
SYNE2-211ENST00000553801 HEYLQ9NQ87 328 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-211ENST00000553801 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-211ENST00000553801 B3GALNT1O75752 331 aa12.61□□□□□ -0.39
SYNE2-211ENST00000553801 NUP62P37198 522 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-211ENST00000553801 C2orf83Q53S99 150 aa12.61□□□□□ -0.39
SYNE2-211ENST00000553801 RNASE10Q5GAN6 216 aaKnown RBP12.61□□□□□ -0.39
SYNE2-211ENST00000553801 FAM222AQ5U5X8 452 aa12.61□□□□□ -0.39
SYNE2-211ENST00000553801 FAM219AQ8IW50 185 aa12.61□□□□□ -0.39
SYNE2-211ENST00000553801 ZFAND1Q8TCF1 268 aa12.61□□□□□ -0.39
SYNE2-211ENST00000553801 COMMD3Q9UBI1 195 aa12.61□□□□□ -0.39
SYNE2-211ENST00000553801 PFDN2Q9UHV9 154 aa12.61□□□□□ -0.39
SYNE2-211ENST00000553801 TOMM40O96008 361 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 IGKV3-20P01619 116 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 RD3LP0DJH9 198 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 HTN3P15516 51 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 UCP1P25874 307 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 ID1P41134 155 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 FAM3BP58499 235 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-211ENST00000553801 SP6Q3SY56 376 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 AARDQ4LEZ3 155 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 NOXA1Q86UR1 476 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 LHFPL1Q86WI0 220 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 ARRDC1Q8N5I2 433 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 CLUHP3Q96NS8 147 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 GOLT1BQ9Y3E0 138 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 TMED3Q9Y3Q3 217 aa12.6□□□□□ -0.39
SYNE2-211ENST00000553801 NACAE9PAV3 2078 aa12.59□□□□□ -0.39
SYNE2-211ENST00000553801 A0A0G2JRQ6 117 aa12.59□□□□□ -0.39
SYNE2-211ENST00000553801 FXYD7P58549 80 aa12.59□□□□□ -0.39
SYNE2-211ENST00000553801 LSM3P62310 102 aaKnown RBP12.59□□□□□ -0.39
SYNE2-211ENST00000553801 SPATA31B1PQ5VZV4 182 aa12.59□□□□□ -0.39
SYNE2-211ENST00000553801 FOXI2Q6ZQN5 318 aa12.59□□□□□ -0.39
SYNE2-211ENST00000553801 SLC24A4Q8NFF2 622 aa12.59□□□□□ -0.39
SYNE2-211ENST00000553801 NPIPB3Q92617 1050 aa12.59□□□□□ -0.39
SYNE2-211ENST00000553801 LINC00052Q96N35 136 aa12.59□□□□□ -0.39
SYNE2-211ENST00000553801 SAV1Q9H4B6 383 aaPredicted RBP12.59□□□□□ -0.39
SYNE2-211ENST00000553801 C16orf90A8MZG2 172 aa12.58□□□□□ -0.4
SYNE2-211ENST00000553801 CDK2AP2O75956 126 aa12.58□□□□□ -0.4
SYNE2-211ENST00000553801 HBE1P02100 147 aa12.58□□□□□ -0.4
SYNE2-211ENST00000553801 GDF5OSQ5U4N7 250 aa12.58□□□□□ -0.4
SYNE2-211ENST00000553801 C7orf50Q9BRJ6 194 aaKnown RBP12.58□□□□□ -0.4
SYNE2-211ENST00000553801 HSPG2P98160 4391 aa12.58□□□□□ -0.4
SYNE2-211ENST00000553801 CEBPZOSA8MTT3 80 aa12.57□□□□□ -0.4
SYNE2-211ENST00000553801 TBPP20226 339 aa12.57□□□□□ -0.4
SYNE2-211ENST00000553801 DAD1P61803 113 aa12.57□□□□□ -0.4
SYNE2-211ENST00000553801 TMEM88Q6PEY1 159 aa12.57□□□□□ -0.4
SYNE2-211ENST00000553801 C15orf53Q8NAA6 179 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms