RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 FOXC2Q99958 501 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 SELLP14151 372 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 B3GALT5-AS1P59052 145 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 TMEM170BQ5T4T1 132 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 FOXL2NBQ6ZUU3 175 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 RPP25LQ8N5L8 163 aaKnown RBP12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 TTC9CQ8N5M4 171 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 SPTBN2O15020 2390 aa12.68□□□□□ -0.38
ARHGEF40-202ENST00000553709 FAM168AQ92567 244 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 TNFRSF14Q92956 283 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 SCGB3A1Q96QR1 104 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 HIST1H2BLQ99880 126 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 CDKN1AP38936 164 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 COPS9Q8WXC6 57 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 FABP5P3A8MUU1 101 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 LYNX1G3V0Z9 82 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 H7C1H1 209 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 LYNX1P0DP58 116 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 HGFACQ04756 655 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 PSMG4Q5JS54 123 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 TIMP3P35625 211 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 C5orf24Q7Z6I8 188 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 ZNF581Q9P0T4 197 aa12.67□□□□□ -0.38
ARHGEF40-202ENST00000553709 CD177Q8N6Q3 437 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 NEUROG1Q92886 237 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 CD24P25063 80 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 CFPP27918 469 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 ST6GALNAC3Q8NDV1 305 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 SLC50A1Q9BRV3 221 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 HAX1O00165 279 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 NPFFO15130 113 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 LYL1P12980 280 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 Q6ZS49 121 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 PSG8Q9UQ74 426 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 TIMM23O14925 209 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 LILRA1O75019 489 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 MEIG1Q5JSS6 88 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 HIST3H2BBQ8N257 126 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 BMPERQ8N8U9 685 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 ASCL2Q99929 193 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 RFNGQ9Y644 331 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 DENND4CQ5VZ89 1909 aa12.66□□□□□ -0.38
ARHGEF40-202ENST00000553709 OR10J3Q5JRS4 329 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 C7orf69Q9H7B7 122 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 NCOR1O75376 2440 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 SMAD7O15105 426 aaKnown RBP12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 PLAURQ03405 335 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 Q6P435 159 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 OBSL1O75147 1896 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 TRAV5A0A0B4J249 113 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 LAMTOR2Q9Y2Q5 125 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 E9PLN8 166 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 C8orf46Q8TAG6 207 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 TSKUQ8WUA8 353 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 VKORC1Q9BQB6 163 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 METRNQ9UJH8 293 aa12.65□□□□□ -0.38
ARHGEF40-202ENST00000553709 MDS2Q8NDY4 140 aa12.65□□□□□ -0.39
ARHGEF40-202ENST00000553709 C2orf16Q68DN1 1984 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 AKAP6Q13023 2319 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 MPDZO75970 2070 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 A0A1B0GV72 72 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 IGHV3-11P01762 117 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 C10orf55Q5SWW7 151 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 SPATA31B1PQ5VZV4 182 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 CLDN16Q9Y5I7 305 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 SLC25A15Q9Y619 301 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 ASCL4Q6XD76 172 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 TNFRSF18Q9Y5U5 241 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 PAX1P15863 534 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 MGST2Q99735 147 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 MOB4Q9Y3A3 225 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 E9PQ18 207 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 CA1P00915 261 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 RNASE4P34096 147 aaKnown RBP12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 FOXL1Q12952 345 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 LINC01551Q86U37 167 aa12.64□□□□□ -0.39
ARHGEF40-202ENST00000553709 FAM181BA6NEQ2 426 aa12.63□□□□□ -0.39
ARHGEF40-202ENST00000553709 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF40-202ENST00000553709 THBDP07204 575 aa12.63□□□□□ -0.39
ARHGEF40-202ENST00000553709 LINC00614P0C842 121 aa12.63□□□□□ -0.39
ARHGEF40-202ENST00000553709 GFI1BQ5VTD9 330 aa12.63□□□□□ -0.39
ARHGEF40-202ENST00000553709 LEPP41159 167 aa12.63□□□□□ -0.39
ARHGEF40-202ENST00000553709 RHOGP84095 191 aa12.63□□□□□ -0.39
ARHGEF40-202ENST00000553709 FAM71F2Q6NXP2 309 aa12.63□□□□□ -0.39
ARHGEF40-202ENST00000553709 AGMATQ9BSE5 352 aa12.63□□□□□ -0.39
ARHGEF40-202ENST00000553709 SEPSECSQ9HD40 501 aaKnown RBP12.63□□□□□ -0.39
ARHGEF40-202ENST00000553709 TRAV3A0A0B4J244 114 aa12.63□□□□□ -0.39
ARHGEF40-202ENST00000553709 MRPL16Q9NX20 251 aaKnown RBP12.63□□□□□ -0.39
ARHGEF40-202ENST00000553709 SUMO2P61956 95 aaKnown RBP12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 RSPO3Q9BXY4 272 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 TRAV9-2A0A087WT02 112 aa12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 LINC00473A8K010 186 aa12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 AMBPP02760 352 aa12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 TMEM200BQ69YZ2 307 aa12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 ATP5L2Q7Z4Y8 100 aa12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 NUTF2P61970 127 aaKnown RBP12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 SAMD13Q5VXD3 122 aa12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 COQ2Q96H96 371 aa12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 BEX4Q9NWD9 120 aaPredicted RBP12.62□□□□□ -0.39
ARHGEF40-202ENST00000553709 IGHV2-26A0A0B4J1V2 119 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms