RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	GLIPR1L1	Q6UWM5	242 aa		3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	UBAC2	Q8NBM4	344 aa		3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	STXBP6	Q8NFX7	210 aa		3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	OR6M1	Q8NGM8	313 aa		3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	TMEM167A	Q8TBQ9	72 aa		3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	DNAJC9	Q8WXX5	260 aa		3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	GNPNAT1	Q96EK6	184 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	C7orf50	Q9BRJ6	194 aa	Known RBP	3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	FAAP24	Q9BTP7	215 aa		3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	OR2D2	Q9H210	308 aa		3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	BANF2	Q9H503	90 aa		3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	RDH8	Q9NYR8	311 aa		3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	TAS2R4	Q9NYW5	299 aa		3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	PRELID3B	Q9Y3B1	194 aa		3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686	RBM7	Q9Y580	266 aa	Known RBP	3.91	□□□□□ -1.78
ATXN3-223	ENST00000553686		H3BMM0	161 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	SIVA1	O15304	175 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	KBTBD11	O94819	623 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	NAPSA	O96009	420 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	CST1	P01037	141 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	CTSG	P08311	255 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	MT1HL1	P0DM35	61 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	CRHBP	P24387	322 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	DUT	P33316	252 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	SNRPD3	P62318	126 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	RPL8	P62917	257 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	MRPL28	Q13084	256 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	RCN1	Q15293	331 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	ESRG	Q1W209	222 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR10K2	Q6IF99	312 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	RXFP4	Q8TDU9	374 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	GPR148	Q8TDV2	347 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686		Q96MT0	163 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	ZNF184	Q99676	751 aa	Predicted RBP	3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	FGFR1OP2	Q9NVK5	253 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	IMPAD1	Q9NX62	359 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	MRPS7	Q9Y2R9	242 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	NACA	E9PAV3	2078 aa		3.9	□□□□□ -1.79
ATXN3-223	ENST00000553686	TRBV6-6	A0A0A6YYG2	114 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	HELT	A6NFD8	242 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	SNURFL	B1AK76	121 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686		K7EP13	123 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	FCGR3B	O75015	233 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	HLA-G	P17693	338 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	NPPC	P23582	126 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	AP2S1	P53680	142 aa	Predicted RBP	3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	TMEM50B	P56557	158 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	KRTAP10-4	P60372	401 aa	Predicted RBP	3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	HLA-DRB3	P79483	266 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	PSMG4	Q5JS54	123 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	RBM48	Q5RL73	367 aa	Known RBP	3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	PRR27	Q6MZM9	219 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	ZNF773	Q6PK81	442 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	JAGN1	Q8N5M9	183 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR4C16	Q8NGL9	310 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	CMTM5	Q96DZ9	223 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	NARS2	Q96I59	477 aa	Known RBP	3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	C4orf36	Q96KX1	117 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	TXN2	Q99757	166 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	PDCD1LG2	Q9BQ51	273 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	PLEKHJ1	Q9NW61	149 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	CKLF	Q9UBR5	152 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	CRCT1	Q9UGL9	99 aa		3.89	□□□□□ -1.79
ATXN3-223	ENST00000553686	IGHV3-66	A0A0C4DH42	116 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	HRAS	P01112	189 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	M6PR	P20645	277 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	GBX2	P52951	348 aa	Predicted RBP	3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	DHRS2	Q13268	280 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR5I1	Q13606	314 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR2G6	Q5TZ20	316 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	THOC7	Q6I9Y2	204 aa	Known RBP	3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686		Q6ZSA8	131 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	C6orf201	Q7Z4U5	140 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	CDH26	Q8IXH8	852 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	VKORC1L1	Q8N0U8	176 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	PUSL1	Q8N0Z8	303 aa	Known RBP	3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	ACBD7	Q8N6N7	88 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	GDPD1	Q8N9F7	314 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686		Q8NBF4	154 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR10J5	Q8NHC4	309 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	FCGR1B	Q92637	280 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	TMEM208	Q9BTX3	173 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	COMMD5	Q9GZQ3	224 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	NXF2	Q9GZY0	626 aa	Known RBP	3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	WDR83OS	Q9Y284	106 aa		3.88	□□□□□ -1.79
ATXN3-223	ENST00000553686	TRAV26-1	A0A087WT03	109 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	IGHV3-21	A0A0B4J1V1	117 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	IGLC7	A0M8Q6	106 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	TRDC	B7Z8K6	153 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686		H3BNG1	76 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	BET1	O15155	118 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	PSCA	O43653	123 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	SERPINE2	P07093	398 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR13C7	P0DN81	318 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	HLA-DRB4	P13762	266 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	SRM	P19623	302 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	CEL	P19835	753 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	CALB2	P22676	271 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms