RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SDHCQ99643 169 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-206ENST00000553529 SHPKQ9UHJ6 478 aa13.4□□□□□ -0.26
SHMT2-206ENST00000553529 VAMP1P23763 118 aa13.39□□□□□ -0.27
SHMT2-206ENST00000553529 OR10J1P30954 320 aa13.39□□□□□ -0.27
SHMT2-206ENST00000553529 SMCO1Q147U7 214 aa13.39□□□□□ -0.27
SHMT2-206ENST00000553529 LYG2Q86SG7 212 aa13.39□□□□□ -0.27
SHMT2-206ENST00000553529 DTD1Q8TEA8 209 aa13.39□□□□□ -0.27
SHMT2-206ENST00000553529 GINS3Q9BRX5 216 aa13.39□□□□□ -0.27
SHMT2-206ENST00000553529 HSPB7Q9UBY9 170 aa13.39□□□□□ -0.27
SHMT2-206ENST00000553529 RABAC1Q9UI14 185 aa13.39□□□□□ -0.27
SHMT2-206ENST00000553529 FLVCR2Q9UPI3 526 aa13.39□□□□□ -0.27
SHMT2-206ENST00000553529 ALMS1Q8TCU4 4167 aa13.39□□□□□ -0.27
SHMT2-206ENST00000553529 CRYBB3P26998 211 aa13.38□□□□□ -0.27
SHMT2-206ENST00000553529 P2RY1P47900 373 aa13.38□□□□□ -0.27
SHMT2-206ENST00000553529 APOC4P55056 127 aa13.38□□□□□ -0.27
SHMT2-206ENST00000553529 LGI3Q8N145 548 aa13.38□□□□□ -0.27
SHMT2-206ENST00000553529 STXBP6Q8NFX7 210 aa13.38□□□□□ -0.27
SHMT2-206ENST00000553529 IL17DQ8TAD2 202 aa13.38□□□□□ -0.27
SHMT2-206ENST00000553529 KCNIP3Q9Y2W7 256 aa13.38□□□□□ -0.27
SHMT2-206ENST00000553529 KNCNA6PVL3 124 aa13.37□□□□□ -0.27
SHMT2-206ENST00000553529 MPTX1A8MV57 137 aa13.37□□□□□ -0.27
SHMT2-206ENST00000553529 IFNA10P01566 189 aa13.37□□□□□ -0.27
SHMT2-206ENST00000553529 NPPCP23582 126 aa13.37□□□□□ -0.27
SHMT2-206ENST00000553529 OR1S1Q8NH92 325 aa13.37□□□□□ -0.27
SHMT2-206ENST00000553529 RNF183Q96D59 192 aa13.37□□□□□ -0.27
SHMT2-206ENST00000553529 MAGT1Q9H0U3 335 aa13.37□□□□□ -0.27
SHMT2-206ENST00000553529 EPPK1P58107 5090 aaKnown RBP13.37□□□□□ -0.27
SHMT2-206ENST00000553529 AGRNO00468 2067 aa13.36□□□□□ -0.27
SHMT2-206ENST00000553529 IGKV1D-37A0A075B6S9 117 aa13.36□□□□□ -0.27
SHMT2-206ENST00000553529 DNASE2O00115 360 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-206ENST00000553529 DEFB4AO15263 64 aa13.36□□□□□ -0.27
SHMT2-206ENST00000553529 PITX3O75364 302 aa13.36□□□□□ -0.27
SHMT2-206ENST00000553529 IL4P05112 153 aa13.36□□□□□ -0.27
SHMT2-206ENST00000553529 ZNF688P0C7X2 276 aa13.36□□□□□ -0.27
SHMT2-206ENST00000553529 S100A5P33763 92 aa13.36□□□□□ -0.27
SHMT2-206ENST00000553529 DEFB1P60022 68 aa13.36□□□□□ -0.27
SHMT2-206ENST00000553529 Q6ZWC4 215 aa13.36□□□□□ -0.27
SHMT2-206ENST00000553529 STPG3Q8N7X2 389 aa13.36□□□□□ -0.27
SHMT2-206ENST00000553529 RNASEH2CQ8TDP1 164 aaKnown RBP13.36□□□□□ -0.27
SHMT2-206ENST00000553529 METTL26Q96S19 204 aa13.36□□□□□ -0.27
SHMT2-206ENST00000553529 U3KQE9 123 aa13.36□□□□□ -0.27
SHMT2-206ENST00000553529 RPS10-NUDT3A0A1W2PQS6 291 aa13.35□□□□□ -0.27
SHMT2-206ENST00000553529 K7EQG2 157 aa13.35□□□□□ -0.27
SHMT2-206ENST00000553529 SFT2D2O95562 160 aa13.35□□□□□ -0.27
SHMT2-206ENST00000553529 HOXB5P09067 269 aa13.35□□□□□ -0.27
SHMT2-206ENST00000553529 ZNF90Q03938 601 aa13.35□□□□□ -0.27
SHMT2-206ENST00000553529 OR51G1Q8NGK1 321 aa13.35□□□□□ -0.27
SHMT2-206ENST00000553529 OR1S2Q8NGQ3 325 aa13.35□□□□□ -0.27
SHMT2-206ENST00000553529 DCANP1Q8TF63 244 aa13.35□□□□□ -0.27
SHMT2-206ENST00000553529 GLMPQ8WWB7 406 aa13.35□□□□□ -0.27
SHMT2-206ENST00000553529 SCGB3A2Q96PL1 93 aa13.35□□□□□ -0.27
SHMT2-206ENST00000553529 ADAP1O75689 374 aa13.34□□□□□ -0.27
SHMT2-206ENST00000553529 GIG44P09565 113 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-206ENST00000553529 PSG1P11464 419 aa13.34□□□□□ -0.27
SHMT2-206ENST00000553529 BTCP35070 178 aa13.34□□□□□ -0.27
SHMT2-206ENST00000553529 FAUP35544 74 aaKnown RBP13.34□□□□□ -0.27
SHMT2-206ENST00000553529 TMEM128Q5BJH2 165 aa13.34□□□□□ -0.27
SHMT2-206ENST00000553529 PAIP2BQ9ULR5 123 aaKnown RBP13.34□□□□□ -0.27
SHMT2-206ENST00000553529 KIR2DL5BA0A0G2JN68 375 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 KIR2DL5BA0A0G2JPC4 375 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 CA1P00915 261 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-206ENST00000553529 SLC25A4P12235 298 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 ANXA3P12429 323 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 C4BPBP20851 252 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 BMI1P35226 326 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 AP3S2P59780 193 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 GAMTQ14353 236 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 C16orf54Q6UWD8 224 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 KIR2DL5AQ8N109 375 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 KIR2DL5BQ8NHK3 375 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 CSTL1Q9H114 145 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 BATF3Q9NR55 127 aa13.33□□□□□ -0.28
SHMT2-206ENST00000553529 CXorf65A6NEN9 183 aa13.32□□□□□ -0.28
SHMT2-206ENST00000553529 H3BP45 60 aa13.32□□□□□ -0.28
SHMT2-206ENST00000553529 TOMM40O96008 361 aa13.32□□□□□ -0.28
SHMT2-206ENST00000553529 IFNA4P05014 189 aa13.32□□□□□ -0.28
SHMT2-206ENST00000553529 HNRNPCP07910 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
SHMT2-206ENST00000553529 UBE2MP61081 183 aaKnown RBP13.32□□□□□ -0.28
SHMT2-206ENST00000553529 YPEL3P61236 119 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-206ENST00000553529 OR2F1Q13607 317 aa13.32□□□□□ -0.28
SHMT2-206ENST00000553529 GGNBP1Q5YKI7 109 aa13.32□□□□□ -0.28
SHMT2-206ENST00000553529 CENPSQ8N2Z9 138 aa13.32□□□□□ -0.28
SHMT2-206ENST00000553529 Q8WTZ3 238 aa13.32□□□□□ -0.28
SHMT2-206ENST00000553529 TP53TG1Q9Y2A0 90 aa13.32□□□□□ -0.28
SHMT2-206ENST00000553529 IGKV1OR2-108A0A075B7D4 117 aa13.31□□□□□ -0.28
SHMT2-206ENST00000553529 TRAV30A0A087WSZ9 112 aa13.31□□□□□ -0.28
SHMT2-206ENST00000553529 ANXA7P20073 488 aaKnown RBP13.31□□□□□ -0.28
SHMT2-206ENST00000553529 PAFAH1B2P68402 229 aa13.31□□□□□ -0.28
SHMT2-206ENST00000553529 LRTM2Q8N967 370 aa13.31□□□□□ -0.28
SHMT2-206ENST00000553529 PBDC1Q9BVG4 233 aa13.31□□□□□ -0.28
SHMT2-206ENST00000553529 CLEC5AQ9NY25 188 aa13.31□□□□□ -0.28
SHMT2-206ENST00000553529 U3KQ87 197 aa13.31□□□□□ -0.28
SHMT2-206ENST00000553529 ZNF701M0R085 212 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-206ENST00000553529 WRBO00258 174 aa13.3□□□□□ -0.28
SHMT2-206ENST00000553529 UBE2CO00762 179 aa13.3□□□□□ -0.28
SHMT2-206ENST00000553529 CCNKO75909 580 aa13.3□□□□□ -0.28
SHMT2-206ENST00000553529 RD3LP0DJH9 198 aa13.3□□□□□ -0.28
SHMT2-206ENST00000553529 SRPXP78539 464 aa13.3□□□□□ -0.28
SHMT2-206ENST00000553529 DHRS2Q13268 280 aa13.3□□□□□ -0.28
SHMT2-206ENST00000553529 SPANXN2Q5MJ10 180 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms