RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 DLK1P80370 383 aa11.31□□□□□ -0.6
MTHFD1-204ENST00000553405 RPEL1Q2QD12 228 aa11.31□□□□□ -0.6
MTHFD1-204ENST00000553405 OR8G2PQ6IF36 304 aa11.31□□□□□ -0.6
MTHFD1-204ENST00000553405 ETFRF1Q6IPR1 90 aa11.31□□□□□ -0.6
MTHFD1-204ENST00000553405 C1QL4Q86Z23 238 aa11.31□□□□□ -0.6
MTHFD1-204ENST00000553405 TMEM190Q8WZ59 177 aa11.31□□□□□ -0.6
MTHFD1-204ENST00000553405 ACY3Q96HD9 319 aa11.31□□□□□ -0.6
MTHFD1-204ENST00000553405 OVOL1O14753 267 aa11.3□□□□□ -0.6
MTHFD1-204ENST00000553405 GNG7O60262 68 aa11.3□□□□□ -0.6
MTHFD1-204ENST00000553405 CST7O76096 145 aa11.3□□□□□ -0.6
MTHFD1-204ENST00000553405 EDN2P20800 178 aa11.3□□□□□ -0.6
MTHFD1-204ENST00000553405 SULT1A1P50225 295 aa11.3□□□□□ -0.6
MTHFD1-204ENST00000553405 VWC2Q2TAL6 325 aa11.3□□□□□ -0.6
MTHFD1-204ENST00000553405 TIGITQ495A1 244 aa11.3□□□□□ -0.6
MTHFD1-204ENST00000553405 OR1S2Q8NGQ3 325 aa11.3□□□□□ -0.6
MTHFD1-204ENST00000553405 RCC1LQ96I51 464 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-204ENST00000553405 ZFAND3Q9H8U3 227 aa11.3□□□□□ -0.6
MTHFD1-204ENST00000553405 PAIP2BQ9ULR5 123 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-204ENST00000553405 LSM4Q9Y4Z0 139 aaKnown RBP11.3□□□□□ -0.6
MTHFD1-204ENST00000553405 MEGF8Q7Z7M0 2845 aa11.29□□□□□ -0.6
MTHFD1-204ENST00000553405 TMEM213A2RRL7 107 aa11.29□□□□□ -0.6
MTHFD1-204ENST00000553405 NDUFA4O00483 81 aa11.29□□□□□ -0.6
MTHFD1-204ENST00000553405 RLN2P04090 185 aa11.29□□□□□ -0.6
MTHFD1-204ENST00000553405 OR10J1P30954 320 aa11.29□□□□□ -0.6
MTHFD1-204ENST00000553405 EWSR1Q01844 656 aaKnown RBP eCLIP11.29□□□□□ -0.6
MTHFD1-204ENST00000553405 OR9G4Q8NGQ1 327 aa11.29□□□□□ -0.6
MTHFD1-204ENST00000553405 SLC35E1Q96K37 410 aa11.29□□□□□ -0.6
MTHFD1-204ENST00000553405 GGACTQ9BVM4 153 aa11.29□□□□□ -0.6
MTHFD1-204ENST00000553405 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 NUPL2O15504 423 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 SCAF4O95104 1147 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 CSN3P07498 182 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 PET100P0DJ07 73 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 IGLL1P15814 213 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 BCAP31P51572 246 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 YPEL3P61236 119 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 NHLH2Q02577 135 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 SLC38A11Q08AI6 406 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 SAMD5Q5TGI4 173 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 TOMM20LQ6UXN7 152 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 TMEM144Q7Z5S9 345 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 OR10P1Q8NGE3 313 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 OR2T35Q8NGX2 323 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 ST6GAL2Q96JF0 529 aa11.28□□□□□ -0.6
MTHFD1-204ENST00000553405 C2orf70A6NJV1 201 aa11.27□□□□□ -0.61
MTHFD1-204ENST00000553405 C8orf88P0DMB2 117 aa11.27□□□□□ -0.61
MTHFD1-204ENST00000553405 CD33P20138 364 aa11.27□□□□□ -0.61
MTHFD1-204ENST00000553405 ZNF90Q03938 601 aa11.27□□□□□ -0.61
MTHFD1-204ENST00000553405 TM4SF20Q53R12 229 aa11.27□□□□□ -0.61
MTHFD1-204ENST00000553405 ZNF600Q6ZNG1 722 aa11.27□□□□□ -0.61
MTHFD1-204ENST00000553405 TMEM182Q6ZP80 229 aaPredicted RBP11.27□□□□□ -0.61
MTHFD1-204ENST00000553405 TMEM217Q8N7C4 229 aa11.27□□□□□ -0.61
MTHFD1-204ENST00000553405 TRGV9Q99603 122 aa11.27□□□□□ -0.61
MTHFD1-204ENST00000553405 SIGLEC8Q9NYZ4 499 aa11.27□□□□□ -0.61
MTHFD1-204ENST00000553405 PUS1Q9Y606 427 aaKnown RBP eCLIP11.27□□□□□ -0.61
MTHFD1-204ENST00000553405 FBN3Q75N90 2809 aa11.27□□□□□ -0.61
MTHFD1-204ENST00000553405 IGHV3OR16-8A0A075B7F1 116 aa11.26□□□□□ -0.61
MTHFD1-204ENST00000553405 SMLR1H3BR10 107 aa11.26□□□□□ -0.61
MTHFD1-204ENST00000553405 TOMM40O96008 361 aa11.26□□□□□ -0.61
MTHFD1-204ENST00000553405 RPL12P30050 165 aaKnown RBP11.26□□□□□ -0.61
MTHFD1-204ENST00000553405 ELLP55199 621 aaPredicted RBP11.26□□□□□ -0.61
MTHFD1-204ENST00000553405 RELQ04864 619 aaPredicted RBP11.26□□□□□ -0.61
MTHFD1-204ENST00000553405 BAXQ07812 192 aa11.26□□□□□ -0.61
MTHFD1-204ENST00000553405 FAM106AQ4KMX7 169 aa11.26□□□□□ -0.61
MTHFD1-204ENST00000553405 OXLD1Q5BKU9 147 aa11.26□□□□□ -0.61
MTHFD1-204ENST00000553405 STX12Q86Y82 276 aa11.26□□□□□ -0.61
MTHFD1-204ENST00000553405 HSPB11Q9Y547 144 aa11.26□□□□□ -0.61
MTHFD1-204ENST00000553405 PRKDCP78527 4128 aaKnown RBP11.26□□□□□ -0.61
MTHFD1-204ENST00000553405 RNF222A6NCQ9 220 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 SEC14L6B5MCN3 397 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 K7EMT4 169 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 PSG1P11464 419 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 S100A11P31949 105 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 FGL1Q08830 312 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 OR5C1Q8NGR4 320 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 THAP6Q8TBB0 222 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 AQP10Q96PS8 301 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 SLC25A31Q9H0C2 315 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 NPVFQ9HCQ7 196 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 TNFSF18Q9UNG2 199 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 WDR83OSQ9Y284 106 aa11.25□□□□□ -0.61
MTHFD1-204ENST00000553405 hCG_2014768A0A024R1R8 64 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 WI2-2373I1.2A0A1W2PRP0 233 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 ZNF320A2RRD8 509 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 ZFP92A6NM28 416 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 G3V4G9 280 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 IGLV1-51P01701 117 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 FOLR2P14207 255 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 AKR1C1Q04828 323 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 KPRPQ5T749 579 aaPredicted RBP11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 STPG3Q8N7X2 389 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 OR11H4Q8NGC9 324 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 MGST2Q99735 147 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 MCRIP2Q9BUT9 160 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 TMEM147Q9BVK8 224 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 DAZ1Q9NQZ3 744 aaKnown RBP11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 UQCC1Q9NVA1 299 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 U3KQE9 123 aa11.24□□□□□ -0.61
MTHFD1-204ENST00000553405 RD3LP0DJH9 198 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms