RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 SRSF4Q08170 494 aaKnown RBP9.55□□□□□ -0.88
SYNE2-208ENST00000553289 LY96Q9Y6Y9 160 aa9.55□□□□□ -0.88
SYNE2-208ENST00000553289 DSCR9P59020 149 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 FAM71F2Q6NXP2 309 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 SPCS1Q9Y6A9 102 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 TRGV11A0A075B6L2 103 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 IGKV1-27A0A075B6S5 117 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 RNASE1P07998 156 aaKnown RBP9.54□□□□□ -0.88
SYNE2-208ENST00000553289 CDKN1AP38936 164 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 FOXF2Q12947 444 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 TMEM14EPQ6UXP3 125 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 CYSLTR1Q9Y271 337 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 DPM2O94777 84 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 CNTFRP26992 372 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 VDAC2P45880 294 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-208ENST00000553289 JMJD8Q96S16 334 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 SLC25A2Q9BXI2 301 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 ALPK2Q86TB3 2170 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 A0A1B0GWB2 263 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 MINOS1Q5TGZ0 78 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 FOXL2NBQ6ZUU3 175 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 MINOS1-NBL1R4GNA1 71 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 PGPEP1LA6NFU8 196 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 PLAURQ03405 335 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 SLC25A48Q6ZT89 311 aaKnown RBP9.54□□□□□ -0.88
SYNE2-208ENST00000553289 SMPXQ9UHP9 88 aa9.54□□□□□ -0.88
SYNE2-208ENST00000553289 RBMY1BA6NDE4 496 aaKnown RBP9.53□□□□□ -0.88
SYNE2-208ENST00000553289 RBMY1EA6NEQ0 496 aaKnown RBP9.53□□□□□ -0.88
SYNE2-208ENST00000553289 WNT2P09544 360 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 CD7P09564 240 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 RBMY1DP0C7P1 496 aaKnown RBP9.53□□□□□ -0.88
SYNE2-208ENST00000553289 RBMY1A1P0DJD3 496 aaKnown RBP9.53□□□□□ -0.88
SYNE2-208ENST00000553289 RBMY1CP0DJD4 496 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 LDLRAD2Q5SZI1 272 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 TRGV9Q99603 122 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 MUC21A0A0G2JKD1 596 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 MUC21A0A140T8X8 626 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 IGHV3-11P01762 117 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 MUC21Q5SSG8 566 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 RALGAPA1Q6GYQ0 2036 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 IGHV2-26A0A0B4J1V2 119 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 AGMATQ9BSE5 352 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 MBNL3Q9NUK0 354 aaKnown RBP9.53□□□□□ -0.88
SYNE2-208ENST00000553289 GBF1Q92538 1859 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 NDUFA3O95167 84 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 QRFPP83859 136 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 PAX8Q06710 450 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 YAE1D1Q9NRH1 226 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 SLC25A15Q9Y619 301 aa9.53□□□□□ -0.88
SYNE2-208ENST00000553289 COQ2Q96H96 371 aa9.52□□□□□ -0.88
SYNE2-208ENST00000553289 VSIRQ9H7M9 311 aa9.52□□□□□ -0.88
SYNE2-208ENST00000553289 TRGV2A0A075B6R0 118 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 SMAD7O15105 426 aaKnown RBP9.52□□□□□ -0.89
SYNE2-208ENST00000553289 IGHV1-8P0DP01 117 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 FAM169BQ8N8A8 192 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 SSBP4Q9BWG4 385 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-208ENST00000553289 ASXL3Q9C0F0 2248 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 IGHV3OR16-8A0A075B7F1 116 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 TSPAN13O95857 204 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 CFPP27918 469 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 CMC4P56277 68 aaPredicted RBP9.52□□□□□ -0.89
SYNE2-208ENST00000553289 ST6GALNAC6Q969X2 333 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 MS4A6AQ9H2W1 248 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 CLDN16Q9Y5I7 305 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 FNDC10F2Z333 226 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 LYL1P12980 280 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 SPSB3Q6PJ21 355 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 STHQ8IWL8 128 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 MDS2Q8NDY4 140 aa9.52□□□□□ -0.89
SYNE2-208ENST00000553289 A0A1B0GWJ7 208 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 COLCA2A8K830 154 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 TMEM178BH3BS89 294 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 ZNF672Q499Z4 452 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-208ENST00000553289 A0A1B0GV72 72 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 PSPNO60542 156 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 CFAP161Q6P656 301 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 SPACA3Q8IXA5 215 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 IGKV1-5P01602 117 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 FOXG1P55316 489 aaPredicted RBP9.51□□□□□ -0.89
SYNE2-208ENST00000553289 SIGLEC15Q6ZMC9 328 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 C10orf126Q8N4M7 172 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 SIP14410 1827 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 SNAI2O43623 268 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 ABCA7Q8IZY2 2146 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 NUDT10Q8NFP7 164 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 NUDT11Q96G61 164 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 HIST1H2BLQ99880 126 aa9.51□□□□□ -0.89
SYNE2-208ENST00000553289 TRAV41A0A0B4J266 112 aa9.5□□□□□ -0.89
SYNE2-208ENST00000553289 TFF1P04155 84 aa9.5□□□□□ -0.89
SYNE2-208ENST00000553289 TMEM200BQ69YZ2 307 aa9.5□□□□□ -0.89
SYNE2-208ENST00000553289 ASCL4Q6XD76 172 aa9.5□□□□□ -0.89
SYNE2-208ENST00000553289 KIF26BQ2KJY2 2108 aa9.5□□□□□ -0.89
SYNE2-208ENST00000553289 M0R1W7 72 aa9.5□□□□□ -0.89
SYNE2-208ENST00000553289 APOMO95445 188 aa9.5□□□□□ -0.89
SYNE2-208ENST00000553289 EFNA4P52798 201 aa9.5□□□□□ -0.89
SYNE2-208ENST00000553289 TPTE2P1Q5T6R2 138 aa9.5□□□□□ -0.89
SYNE2-208ENST00000553289 HIST3H2BBQ8N257 126 aa9.5□□□□□ -0.89
SYNE2-208ENST00000553289 CD177Q8N6Q3 437 aa9.5□□□□□ -0.89
SYNE2-208ENST00000553289 OR10W1Q8NGF6 305 aa9.5□□□□□ -0.89
SYNE2-208ENST00000553289 OR5A1Q8NGJ0 315 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms