RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 C22orf34Q6ZV56 151 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 KIR3DL3Q8N743 410 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 PRR7Q8TB68 274 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 BLNKQ8WV28 456 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 OR8B2Q96RD0 313 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 MCRIP2Q9BUT9 160 aaKnown RBP10.07□□□□□ -0.8
HDAC7-230ENST00000552960 LOC105371242A0A075B767 164 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 FAM87AP0C7U9 286 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 PRB4P10163 310 aaPredicted RBP10.07□□□□□ -0.8
HDAC7-230ENST00000552960 IGLL1P15814 213 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 LOXL3P58215 753 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 EBLN2Q6P2I7 272 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 ORAOV1Q8WV07 137 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 SARAFQ96BY9 339 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 IZUMO1RA6ND01 250 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 GNG5P63218 68 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 C19orf35Q6ZS72 473 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 OR5B3Q8NH48 314 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 OR2V2Q96R30 315 aa10.07□□□□□ -0.8
HDAC7-230ENST00000552960 AMMECR1Q9Y4X0 333 aaPredicted RBP10.07□□□□□ -0.8
HDAC7-230ENST00000552960 DSCAMO60469 2012 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 H3BTX0 84 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 J3QW42 95 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 CORTO00230 105 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 IGLV2-8P01709 118 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 C8orf88P0DMB2 117 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 PPOXP50336 477 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 ZNF137PP52743 207 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 SELENOVP59797 346 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 IGFL3Q6UXB1 125 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 Q6ZT83 130 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 SNRNP40Q96DI7 357 aaKnown RBP10.06□□□□□ -0.8
HDAC7-230ENST00000552960 WASHC3Q9Y3C0 194 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 TRGV8A0A0C4DH27 118 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 FAM181BA6NEQ2 426 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 HIGD1CA8MV81 97 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 NUP35Q8NFH5 326 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 NEUROG1Q92886 237 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 TMEM14BQ9NUH8 114 aa10.06□□□□□ -0.8
HDAC7-230ENST00000552960 FAM90A9PA6NNJ1 464 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 REG1BP48304 166 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 UBE2G1P62253 170 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 FAM90A1Q86YD7 464 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 GCSAMQ8N6F7 178 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 SMIM27A0A1W2PRY6 76 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 COX7A2P2O60397 106 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 GDF5OSQ5U4N7 250 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 TCF24Q7RTU0 167 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 Q8NA96 180 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 NUDT10Q8NFP7 164 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 NUDT11Q96G61 164 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 SLC25A33Q9BSK2 321 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 WNK2Q9Y3S1 2297 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 SRRM4A7MD48 611 aaKnown RBP10.05□□□□□ -0.8
HDAC7-230ENST00000552960 TOX4O94842 621 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 TNFSF4P23510 183 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 SSBP2P81877 361 aaPredicted RBP10.05□□□□□ -0.8
HDAC7-230ENST00000552960 COX19Q49B96 90 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 MPV17L2Q567V2 206 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 SLC25A10Q9UBX3 287 aaPredicted RBP10.05□□□□□ -0.8
HDAC7-230ENST00000552960 RAXQ9Y2V3 346 aa10.05□□□□□ -0.8
HDAC7-230ENST00000552960 TRAV9-2A0A087WT02 112 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 APELAP0DMC3 54 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 PSG1P11464 419 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 KIR2DS2P43631 304 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 AARDQ4LEZ3 155 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 TNFRSF19Q9NS68 423 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 FOXA2Q9Y261 457 aaPredicted RBP10.04□□□□□ -0.8
HDAC7-230ENST00000552960 IGHV2OR16-5A0A0B4J2B6 119 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 ITGB1BP1O14713 200 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 MMP23AO75900 390 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 CA7P43166 264 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 CDKN1BP46527 198 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 TBR1Q16650 682 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 ZNF474Q6S9Z5 364 aaPredicted RBP10.04□□□□□ -0.8
HDAC7-230ENST00000552960 PMCHL2Q9BQD1 86 aa10.04□□□□□ -0.8
HDAC7-230ENST00000552960 hDV102S1A0JD36 115 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 M0R1B8 84 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 NUDT3O95989 172 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 ORM2P19652 201 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 DDB2Q92466 427 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 PAXXQ9BUH6 204 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 COMMD5Q9GZQ3 224 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 SAP30LQ9HAJ7 183 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 PRNDQ9UKY0 176 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 ACACBO00763 2458 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 TEX50A0A1B0GTY4 177 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 A0A1W2PRE2 83 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 OR4C46A6NHA9 309 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 SRRM5B3KS81 715 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 CSN3P07498 182 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 LINC00173Q6ZV60 143 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 ITLN1Q8WWA0 313 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 IGF2BP2-AS1Q96M15 143 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 IGHV3-21A0A0B4J1V1 117 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 SNAI2O43623 268 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 IGKV3-15P01624 115 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 C10orf55Q5SWW7 151 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 CCL13Q99616 98 aa10.03□□□□□ -0.8
HDAC7-230ENST00000552960 SLC25A5P05141 298 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms