RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 LINC00173Q6ZV60 143 aa9.46□□□□□ -0.89
PPFIA2-227ENST00000552948 PRNTQ86SH4 94 aa9.46□□□□□ -0.89
PPFIA2-227ENST00000552948 RAB37Q96AX2 223 aa9.46□□□□□ -0.89
PPFIA2-227ENST00000552948 FOXA2Q9Y261 457 aaPredicted RBP9.46□□□□□ -0.89
PPFIA2-227ENST00000552948 TMSB15BA0A087X1C1 80 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 FAM90A9PA6NNJ1 464 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 CCL8P80075 99 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 C12orf54Q6X4T0 127 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 Q8N976 141 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 ZNF430Q9H8G1 570 aaPredicted RBP9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 IGHV2-26A0A0B4J1V2 119 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 KBTBD11-OT1A0A1B0GTJ5 212 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 SMIM27A0A1W2PRY6 76 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 PPIAL4DF5H284 164 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 DLL1O00548 723 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 PRCDQ00LT1 54 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 PLGLAQ15195 96 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 NEUROG1Q92886 237 aa9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 MRPL27Q9P0M9 148 aaKnown RBP9.46□□□□□ -0.9
PPFIA2-227ENST00000552948 TMPRSS3P57727 454 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 LYZP61626 148 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 BPIFA4PQ86YQ2 179 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 ASCL2Q99929 193 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 TMEM14BQ9NUH8 114 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 PTPRZ1P23471 2315 aaPredicted RBP9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 SRRM5B3KS81 715 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 PCNX2A6NKB5 2137 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 GAGE10A6NGK3 116 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 SLC25A17O43808 307 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 C1orf229Q6ZS94 237 aaPredicted RBP9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 PNKDQ8N490 385 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 ZNF503Q96F45 646 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 C19orf24Q9BVV8 132 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 RNF7Q9UBF6 113 aa9.45□□□□□ -0.9
PPFIA2-227ENST00000552948 SRRM4A7MD48 611 aaKnown RBP9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 K7ERU9 68 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 NBEAP1P0C6P0 100 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 SSBP2P81877 361 aaPredicted RBP9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 TRIP6Q15654 476 aaKnown RBP9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 BHLHA15Q7RTS1 189 aaPredicted RBP9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 C9orf106Q8NAJ2 232 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 C1orf159Q96HA4 380 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 MRPL32Q9BYC8 188 aaKnown RBP9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 MRPL20Q9BYC9 149 aaKnown RBP9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 TRAV8-1A0A0A6YYK1 113 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 MMP23AO75900 390 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 CT45A6P0DMU7 189 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 CT45A5P0DMU8 189 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 CT45A7P0DMV0 189 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 SPRNQ5BIV9 151 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 ARL6IP6Q8N6S5 226 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 TMEM116Q8NCL8 245 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 SARAFQ96BY9 339 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 SH3BGRL2Q9UJC5 107 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 WDFY3Q8IZQ1 3526 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 C21orf140B9A014 251 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 PRSS46E5RG02 174 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 LOXL3P58215 753 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 ARF6P62330 175 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 PRB3Q04118 309 aaPredicted RBP9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 PERPQ96FX8 193 aa9.44□□□□□ -0.9
PPFIA2-227ENST00000552948 IGLC7A0M8Q6 106 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 SYS1-DBNDD2H3BUS1 97 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 HLA-DRB1P01911 266 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 RBP4P02753 201 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 CCL3L1P16619 93 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 ZCCHC24Q8N2G6 241 aaKnown RBP9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 RPP21Q9H633 154 aaKnown RBP9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 WISP2O76076 250 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 RNASE2P10153 161 aaKnown RBP9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 RIPPLY3P57055 190 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 GPR82Q96P67 336 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 EPDR1Q9UM22 224 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 MED13LQ71F56 2210 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 IGHV1-18A0A0C4DH31 117 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 RBX1P62877 108 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 GDF5OSQ5U4N7 250 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 GOLT1AQ6ZVE7 132 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 SRSF12Q8WXF0 261 aaKnown RBP9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 FNDC4Q9H6D8 234 aaPredicted RBP9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 HSPB8Q9UJY1 196 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 HILPDAQ9Y5L2 63 aa9.43□□□□□ -0.9
PPFIA2-227ENST00000552948 NAV3Q8IVL0 2385 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 TRAV30A0A087WSZ9 112 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 FBLL1A6NHQ2 334 aaKnown RBP9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 IGLV2-8P01709 118 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 MUC15Q8N387 334 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 CCL17Q92583 94 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 CST9LQ9H4G1 147 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 CEP192Q8TEP8 1941 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 KIAA1549Q9HCM3 1950 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 CACNA1BQ00975 2339 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 NBASA2RRP1 2371 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 ITGB1BP1O14713 200 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 LIPFP07098 398 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 FXYD7P58549 80 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 TM4SF20Q53R12 229 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 ZNF329Q86UD4 541 aa9.42□□□□□ -0.9
PPFIA2-227ENST00000552948 SLC25A2Q9BXI2 301 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms