RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 HECTD4Q9Y4D8 3996 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 IGHV3-21A0A0B4J1V1 117 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 ZNF320A2RRD8 509 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 K7EIM0 57 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 IFNA21P01568 189 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 ATF4P18848 351 aaPredicted RBP8.82□□□□□ -1
CKAP4-202ENST00000552828 HTR2BP41595 481 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 TNFRSF9Q07011 255 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 FCN2Q15485 313 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 GGNBP1Q5YKI7 109 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 LAMTOR1Q6IAA8 161 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 MARC2Q969Z3 335 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 ATP6V0BQ99437 205 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 KRTAP17-1Q9BYP8 105 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 HSPB7Q9UBY9 170 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 BOLA1Q9Y3E2 137 aa8.82□□□□□ -1
CKAP4-202ENST00000552828 NUPR2A6NF83 97 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 I3L2K1 104 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 CORTO00230 105 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 PITX3O75364 302 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 NXPH3O95157 252 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 LY6G6CO95867 125 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 MT-CO2P00403 227 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 RNASE2P10153 161 aaKnown RBP8.81□□□□□ -1
CKAP4-202ENST00000552828 GPR183P32249 361 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 ELLP55199 621 aaPredicted RBP8.81□□□□□ -1
CKAP4-202ENST00000552828 TM4SF20Q53R12 229 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 PVRIGQ6DKI7 326 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 UNQ9165/PRO28630Q6UXU0 137 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 Q6ZWC4 215 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 C9orf62Q8N4C0 152 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 MITD1Q8WV92 249 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 PINX1Q96BK5 328 aaKnown RBP8.81□□□□□ -1
CKAP4-202ENST00000552828 RBKSQ9H477 322 aa8.81□□□□□ -1
CKAP4-202ENST00000552828 MRPL27Q9P0M9 148 aaKnown RBP8.81□□□□□ -1
CKAP4-202ENST00000552828 OR2T8A6NH00 312 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 FAM90A26D6RGX4 464 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 TGOLN2O43493 480 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 MED6O75586 246 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 ADAP1O75689 374 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 SCAF4O95104 1147 aaKnown RBP8.8□□□□□ -1
CKAP4-202ENST00000552828 IL5P05113 134 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 BMI1P35226 326 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 MFAP4P55083 255 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 EWSR1Q01844 656 aaKnown RBP eCLIP8.8□□□□□ -1
CKAP4-202ENST00000552828 BSXQ3C1V8 233 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 Q56UQ5 140 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 SPSB3Q6PJ21 355 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 CEMP1Q6PRD7 247 aaPredicted RBP8.8□□□□□ -1
CKAP4-202ENST00000552828 BTNL8Q6UX41 500 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 UBAC2Q8NBM4 344 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 SLC24A4Q8NFF2 622 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 OR11H7Q8NGC8 314 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 DTD1Q8TEA8 209 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 ZNF431Q8TF32 576 aaPredicted RBP8.8□□□□□ -1
CKAP4-202ENST00000552828 BSCL2Q96G97 398 aaPredicted RBP8.8□□□□□ -1
CKAP4-202ENST00000552828 TXN2Q99757 166 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 SELENOKQ9Y6D0 94 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 U3KQ87 197 aa8.8□□□□□ -1
CKAP4-202ENST00000552828 A0A0J9YWU9 116 aa8.79□□□□□ -1
CKAP4-202ENST00000552828 CXorf65A6NEN9 183 aa8.79□□□□□ -1
CKAP4-202ENST00000552828 UBE2CO00762 179 aa8.79□□□□□ -1
CKAP4-202ENST00000552828 SPRY2O43597 315 aa8.79□□□□□ -1
CKAP4-202ENST00000552828 IFNA10P01566 189 aa8.79□□□□□ -1
CKAP4-202ENST00000552828 FCGR2BP31994 310 aaPredicted RBP8.79□□□□□ -1
CKAP4-202ENST00000552828 APOC4P55056 127 aa8.79□□□□□ -1
CKAP4-202ENST00000552828 ATP5IP56385 69 aaPredicted RBP8.79□□□□□ -1
CKAP4-202ENST00000552828 C2orf83Q53S99 150 aa8.79□□□□□ -1
CKAP4-202ENST00000552828 RBPMS2Q6ZRY4 209 aaKnown RBP8.79□□□□□ -1
CKAP4-202ENST00000552828 SEC22CQ9BRL7 303 aa8.79□□□□□ -1
CKAP4-202ENST00000552828 ZNF436Q9C0F3 470 aaPredicted RBP8.79□□□□□ -1
CKAP4-202ENST00000552828 UFC1Q9Y3C8 167 aa8.79□□□□□ -1
CKAP4-202ENST00000552828 HSPB11Q9Y547 144 aa8.79□□□□□ -1
CKAP4-202ENST00000552828 KIR2DL5BA0A0G2JN68 375 aa8.78□□□□□ -1
CKAP4-202ENST00000552828 KIR2DL5BA0A0G2JPC4 375 aa8.78□□□□□ -1
CKAP4-202ENST00000552828 RPS10-NUDT3A0A1W2PQS6 291 aa8.78□□□□□ -1
CKAP4-202ENST00000552828 SNRPGP15A8MWD9 76 aa8.78□□□□□ -1
CKAP4-202ENST00000552828 TSPAN4O14817 238 aa8.78□□□□□ -1
CKAP4-202ENST00000552828 NUPL2O15504 423 aaKnown RBP8.78□□□□□ -1
CKAP4-202ENST00000552828 IGHV3-48P01763 117 aa8.78□□□□□ -1
CKAP4-202ENST00000552828 NPY1RP25929 384 aa8.78□□□□□ -1
CKAP4-202ENST00000552828 OPRK1P41145 380 aa8.78□□□□□ -1
CKAP4-202ENST00000552828 NPBWR1P48145 328 aa8.78□□□□□ -1
CKAP4-202ENST00000552828 PMS2P11Q13670 270 aa8.78□□□□□ -1
CKAP4-202ENST00000552828 KIR2DL5AQ8N109 375 aa8.78□□□□□ -1
CKAP4-202ENST00000552828 C12orf45Q8N5I9 185 aaPredicted RBP8.78□□□□□ -1
CKAP4-202ENST00000552828 KIR2DL5BQ8NHK3 375 aa8.78□□□□□ -1
CKAP4-202ENST00000552828 RNASEH2CQ8TDP1 164 aaKnown RBP8.78□□□□□ -1
CKAP4-202ENST00000552828 CIB3Q96Q77 187 aaPredicted RBP8.78□□□□□ -1
CKAP4-202ENST00000552828 SPAG8Q99932 426 aaPredicted RBP8.78□□□□□ -1
CKAP4-202ENST00000552828 MPTX1A8MV57 137 aa8.77□□□□□ -1.01
CKAP4-202ENST00000552828 F8W735 103 aaPredicted RBP8.77□□□□□ -1.01
CKAP4-202ENST00000552828 SYNGR2O43760 224 aa8.77□□□□□ -1.01
CKAP4-202ENST00000552828 GNG7O60262 68 aa8.77□□□□□ -1.01
CKAP4-202ENST00000552828 CTSGP08311 255 aa8.77□□□□□ -1.01
CKAP4-202ENST00000552828 C4BPBP20851 252 aa8.77□□□□□ -1.01
CKAP4-202ENST00000552828 ETFRF1Q6IPR1 90 aa8.77□□□□□ -1.01
CKAP4-202ENST00000552828 TMEM190Q8WZ59 177 aa8.77□□□□□ -1.01
CKAP4-202ENST00000552828 RNF183Q96D59 192 aa8.77□□□□□ -1.01
CKAP4-202ENST00000552828 CHRDL1Q9BU40 450 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms