RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 C19orf54Q5BKX5 351 aa8.85□□□□□ -0.99
CACNB3-224ENST00000552812 TOR2AQ5JU69 321 aa8.85□□□□□ -0.99
CACNB3-224ENST00000552812 FAM122CQ6P4D5 195 aa8.85□□□□□ -0.99
CACNB3-224ENST00000552812 LCN15Q6UWW0 184 aa8.85□□□□□ -0.99
CACNB3-224ENST00000552812 SSX7Q7RTT5 188 aa8.85□□□□□ -0.99
CACNB3-224ENST00000552812 SLC35E3Q7Z769 313 aa8.85□□□□□ -0.99
CACNB3-224ENST00000552812 OR5T1Q8NG75 326 aa8.85□□□□□ -0.99
CACNB3-224ENST00000552812 SMDT1Q9H4I9 107 aa8.85□□□□□ -0.99
CACNB3-224ENST00000552812 TNFRSF19Q9NS68 423 aa8.85□□□□□ -0.99
CACNB3-224ENST00000552812 ZNF580Q9UK33 172 aa8.85□□□□□ -0.99
CACNB3-224ENST00000552812 TRAV41A0A0B4J266 112 aa8.84□□□□□ -0.99
CACNB3-224ENST00000552812 SH2D7A6NKC9 451 aaPredicted RBP8.84□□□□□ -0.99
CACNB3-224ENST00000552812 LINC01548A6NM66 108 aa8.84□□□□□ -0.99
CACNB3-224ENST00000552812 CLN5O75503 358 aa8.84□□□□□ -0.99
CACNB3-224ENST00000552812 CD5P06127 495 aa8.84□□□□□ -0.99
CACNB3-224ENST00000552812 IGLC1P0CG04 106 aa8.84□□□□□ -0.99
CACNB3-224ENST00000552812 ZP3P21754 424 aa8.84□□□□□ -0.99
CACNB3-224ENST00000552812 NPBWR1P48145 328 aa8.84□□□□□ -0.99
CACNB3-224ENST00000552812 RHOBP62745 196 aa8.84□□□□□ -0.99
CACNB3-224ENST00000552812 GCSAMLQ5JQS6 135 aa8.84□□□□□ -0.99
CACNB3-224ENST00000552812 VN1R17PQ8TDU5 208 aa8.84□□□□□ -0.99
CACNB3-224ENST00000552812 SCRT1Q9BWW7 348 aa8.84□□□□□ -0.99
CACNB3-224ENST00000552812 SVEP1Q4LDE5 3571 aa8.84□□□□□ -0.99
CACNB3-224ENST00000552812 HECTD1Q9ULT8 2610 aa8.84□□□□□ -1
CACNB3-224ENST00000552812 TRAV30A0A087WSZ9 112 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 TRBV9A0A0B4J1U6 114 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 IGHV3-21A0A0B4J1V1 117 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 A0A1B0GV50 99 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 AP4M1O00189 453 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 BRI3O95415 125 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 FABP1P07148 127 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 FCGR2BP31994 310 aaPredicted RBP8.83□□□□□ -1
CACNB3-224ENST00000552812 MFAP4P55083 255 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 CCL20P78556 96 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 ZNF90Q03938 601 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 PEA15Q15121 130 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 GUK1Q16774 197 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 C9orf152Q5JTZ5 239 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 SPNS3Q6ZMD2 512 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 GATAD1Q8WUU5 269 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 PFDN5Q99471 154 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 RNF2Q99496 336 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 PSMB11A5LHX3 300 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 G3V318 75 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 OR2J3O76001 311 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 OR5G3P0C626 314 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 GATA2P23769 480 aaPredicted RBP8.83□□□□□ -1
CACNB3-224ENST00000552812 BLCAPP62952 87 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 SRSF3P84103 164 aaKnown RBP8.83□□□□□ -1
CACNB3-224ENST00000552812 NECAP1Q8NC96 275 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 OR1L4Q8NGR5 311 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 TXN2Q99757 166 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 MRPL32Q9BYC8 188 aaKnown RBP8.83□□□□□ -1
CACNB3-224ENST00000552812 EIF5A2Q9GZV4 153 aaKnown RBP8.83□□□□□ -1
CACNB3-224ENST00000552812 TREM1Q9NP99 234 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 C21orf62Q9NYP8 219 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 FBXL7Q9UJT9 491 aa8.83□□□□□ -1
CACNB3-224ENST00000552812 TEX15Q9BXT5 2789 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 ELOA3CA0A087WX78 387 aaPredicted RBP8.82□□□□□ -1
CACNB3-224ENST00000552812 TMEM218A2RU14 115 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 RBFOX3A6NFN3 312 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 H3BUA1 57 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 SCGB2A1O75556 95 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 IFNA1P01562 189 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 STAG3L2P0CL84 134 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 STAG3L3P0CL85 134 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 HNF1AP20823 631 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 SRP14P37108 136 aaKnown RBP8.82□□□□□ -1
CACNB3-224ENST00000552812 TAGLN2P37802 199 aaKnown RBP8.82□□□□□ -1
CACNB3-224ENST00000552812 PSMB3P49720 205 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 FGF8P55075 233 aaPredicted RBP8.82□□□□□ -1
CACNB3-224ENST00000552812 PLP1P60201 277 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 FAM78BQ5VT40 261 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 TMEM86BQ8N661 226 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 NARS2Q96I59 477 aaKnown RBP8.82□□□□□ -1
CACNB3-224ENST00000552812 SEPSECSQ9HD40 501 aaKnown RBP8.82□□□□□ -1
CACNB3-224ENST00000552812 TMEM160Q9NX00 188 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 FUT9Q9Y231 359 aa8.82□□□□□ -1
CACNB3-224ENST00000552812 FLNAP21333 2647 aaKnown RBP8.81□□□□□ -1
CACNB3-224ENST00000552812 HOXA3O43365 443 aaPredicted RBP8.81□□□□□ -1
CACNB3-224ENST00000552812 GNG7O60262 68 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 NDUFB8O95169 186 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 CXorf1O96002 111 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 IGKV1-17P01599 117 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 PPT1P50897 306 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 RHOGP84095 191 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 KHDC3LQ587J8 217 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 ZNF506Q5JVG8 444 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 RBMS3Q6XE24 437 aaKnown RBP8.81□□□□□ -1
CACNB3-224ENST00000552812 TMEM37Q8WXS4 190 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 LINC00052Q96N35 136 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 ATP6V0BQ99437 205 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 TMEM231Q9H6L2 316 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 DNAJC4Q9NNZ3 241 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 YAE1D1Q9NRH1 226 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 ZNF355PQ9NSJ1 428 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 GAR1Q9NY12 217 aaKnown RBP8.81□□□□□ -1
CACNB3-224ENST00000552812 GNG13Q9P2W3 67 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 CSMD1Q96PZ7 3565 aa8.81□□□□□ -1
CACNB3-224ENST00000552812 FAM223BA6NKX1 122 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms