RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 LINC00299Q6ZSB3 139 aa10.5□□□□□ -0.73
DDX54-210ENST00000552375 ACY3Q96HD9 319 aa10.5□□□□□ -0.73
DDX54-210ENST00000552375 SRD5A3Q9H8P0 318 aa10.5□□□□□ -0.73
DDX54-210ENST00000552375 DAZ1Q9NQZ3 744 aaKnown RBP10.5□□□□□ -0.73
DDX54-210ENST00000552375 PUS1Q9Y606 427 aaKnown RBP eCLIP10.5□□□□□ -0.73
DDX54-210ENST00000552375 TRAV25A0A0B4J276 109 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 PIGBOS1A0A0B4J2F0 54 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 IGHV3-66A0A0C4DH42 116 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 CLN5O75503 358 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 TMEM50AO95807 157 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 IFNA4P05014 189 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 H2AFB2P0C5Z0 115 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 ASAH1Q13510 395 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 MZT2BQ6NZ67 158 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 TOMM20LQ6UXN7 152 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 ENKURQ8TC29 256 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 ZFAND3Q9H8U3 227 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 RETNQ9HD89 108 aa10.49□□□□□ -0.73
DDX54-210ENST00000552375 MRPL27Q9P0M9 148 aaKnown RBP10.49□□□□□ -0.73
DDX54-210ENST00000552375 IGKV3-7A0A075B6H7 116 aa10.48□□□□□ -0.73
DDX54-210ENST00000552375 RBMY1BA6NDE4 496 aaKnown RBP10.48□□□□□ -0.73
DDX54-210ENST00000552375 RBMY1EA6NEQ0 496 aaKnown RBP10.48□□□□□ -0.73
DDX54-210ENST00000552375 SSSCA1O60232 199 aa10.48□□□□□ -0.73
DDX54-210ENST00000552375 IFNA21P01568 189 aa10.48□□□□□ -0.73
DDX54-210ENST00000552375 RBMY1DP0C7P1 496 aaKnown RBP10.48□□□□□ -0.73
DDX54-210ENST00000552375 PRSS54Q6PEW0 395 aa10.48□□□□□ -0.73
DDX54-210ENST00000552375 ZNF600Q6ZNG1 722 aa10.48□□□□□ -0.73
DDX54-210ENST00000552375 RBPMS2Q6ZRY4 209 aaKnown RBP10.48□□□□□ -0.73
DDX54-210ENST00000552375 OR4X1Q8NH49 305 aa10.48□□□□□ -0.73
DDX54-210ENST00000552375 RNASEH2CQ8TDP1 164 aaKnown RBP10.48□□□□□ -0.73
DDX54-210ENST00000552375 CACFD1Q9UGQ2 172 aa10.48□□□□□ -0.73
DDX54-210ENST00000552375 IGHV7-4-1A0A0J9YVY3 117 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 C15orf62A8K5M9 175 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 FAM25EA8MYX2 175 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 SYNGR2O43760 224 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 MED6O75586 246 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 SLC25A6P12236 298 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 OR10J1P30954 320 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 POLR2GP62487 172 aaKnown RBP eCLIP10.47□□□□□ -0.73
DDX54-210ENST00000552375 TMEM116Q8NCL8 245 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 NPIPB3Q92617 1050 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 OR10C1Q96KK4 312 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 UBQLN2Q9UHD9 624 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 U3KQ87 197 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 TENM2Q9NT68 2774 aa10.47□□□□□ -0.73
DDX54-210ENST00000552375 FAM90A26D6RGX4 464 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 APOHP02749 345 aaPredicted RBP10.46□□□□□ -0.73
DDX54-210ENST00000552375 SLC25A4P12235 298 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 NKX2-1P43699 371 aaPredicted RBP10.46□□□□□ -0.73
DDX54-210ENST00000552375 IAH1Q2TAA2 248 aaPredicted RBP10.46□□□□□ -0.73
DDX54-210ENST00000552375 SPANXN5Q5MJ07 72 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 ETFRF1Q6IPR1 90 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 NOXA1Q86UR1 476 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 ZBTB8BQ8NAP8 495 aaPredicted RBP10.46□□□□□ -0.73
DDX54-210ENST00000552375 OR4D5Q8NGN0 318 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 ZNF431Q8TF32 576 aaPredicted RBP10.46□□□□□ -0.73
DDX54-210ENST00000552375 MITD1Q8WV92 249 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 ST8SIA2Q92186 375 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 SLC35E1Q96K37 410 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 RNF2Q99496 336 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 SPAG8Q99932 426 aaPredicted RBP10.46□□□□□ -0.73
DDX54-210ENST00000552375 FAM110AQ9BQ89 295 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 GINS3Q9BRX5 216 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 GSKIPQ9P0R6 139 aa10.46□□□□□ -0.73
DDX54-210ENST00000552375 TRAV14DV4A0A0A6YYC5 116 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 K7EMT4 169 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 CHEK1O14757 476 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 TSPAN4O14817 238 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 SCGB2A1O75556 95 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 IGKV1-17P01599 117 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 IGLC1P0CG04 106 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 TFPI2P48307 235 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 ZFAND6Q6FIF0 208 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 OR1S2Q8NGQ3 325 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 RHPN1-AS1Q9BWJ2 59 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 GGTLC1Q9BX51 225 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 SMPXQ9UHP9 88 aa10.45□□□□□ -0.74
DDX54-210ENST00000552375 RAB11AP62491 216 aa10.44□□□□□ -0.74
DDX54-210ENST00000552375 NRARPQ7Z6K4 114 aa10.44□□□□□ -0.74
DDX54-210ENST00000552375 GBGT1Q8N5D6 347 aa10.44□□□□□ -0.74
DDX54-210ENST00000552375 C12orf45Q8N5I9 185 aaPredicted RBP10.44□□□□□ -0.74
DDX54-210ENST00000552375 CIB3Q96Q77 187 aaPredicted RBP10.44□□□□□ -0.74
DDX54-210ENST00000552375 RCL1Q9Y2P8 373 aaKnown RBP10.44□□□□□ -0.74
DDX54-210ENST00000552375 DNAH1Q9P2D7 4330 aa10.44□□□□□ -0.74
DDX54-210ENST00000552375 TRAV30A0A087WSZ9 112 aa10.43□□□□□ -0.74
DDX54-210ENST00000552375 C5orf51A6NDU8 294 aa10.43□□□□□ -0.74
DDX54-210ENST00000552375 CCNKO75909 580 aa10.43□□□□□ -0.74
DDX54-210ENST00000552375 IL4P05112 153 aa10.43□□□□□ -0.74
DDX54-210ENST00000552375 GAMTQ14353 236 aa10.43□□□□□ -0.74
DDX54-210ENST00000552375 LAMTOR1Q6IAA8 161 aa10.43□□□□□ -0.74
DDX54-210ENST00000552375 OR8G2PQ6IF36 304 aa10.43□□□□□ -0.74
DDX54-210ENST00000552375 TCF24Q7RTU0 167 aa10.43□□□□□ -0.74
DDX54-210ENST00000552375 PSENENQ9NZ42 101 aa10.43□□□□□ -0.74
DDX54-210ENST00000552375 STRAPQ9Y3F4 350 aaKnown RBP10.43□□□□□ -0.74
DDX54-210ENST00000552375 LSM5Q9Y4Y9 91 aaKnown RBP10.43□□□□□ -0.74
DDX54-210ENST00000552375 LOC102724200A0A096LPH7 203 aaPredicted RBP10.42□□□□□ -0.74
DDX54-210ENST00000552375 SMCO3A2RU48 225 aa10.42□□□□□ -0.74
DDX54-210ENST00000552375 ZFP92A6NM28 416 aa10.42□□□□□ -0.74
DDX54-210ENST00000552375 RPP30P78346 268 aaKnown RBP10.42□□□□□ -0.74
DDX54-210ENST00000552375 ZNF90Q03938 601 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms