RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 NEU1Q99519 415 aa13.15□□□□□ -0.3
RPAP3-207ENST00000551293 PDCD10Q9BUL8 212 aa13.15□□□□□ -0.3
RPAP3-207ENST00000551293 TMED3Q9Y3Q3 217 aa13.15□□□□□ -0.3
RPAP3-207ENST00000551293 CORTO00230 105 aa13.14□□□□□ -0.31
RPAP3-207ENST00000551293 HLA-DRB4P13762 266 aa13.14□□□□□ -0.31
RPAP3-207ENST00000551293 GABARAPL2P60520 117 aa13.14□□□□□ -0.31
RPAP3-207ENST00000551293 DHODHQ02127 395 aa13.14□□□□□ -0.31
RPAP3-207ENST00000551293 LPCAT3Q6P1A2 487 aa13.14□□□□□ -0.31
RPAP3-207ENST00000551293 LINC00052Q96N35 136 aa13.14□□□□□ -0.31
RPAP3-207ENST00000551293 YTHDF1Q9BYJ9 559 aaKnown RBP13.14□□□□□ -0.31
RPAP3-207ENST00000551293 ENY2Q9NPA8 101 aa13.14□□□□□ -0.31
RPAP3-207ENST00000551293 NRN1Q9NPD7 142 aa13.14□□□□□ -0.31
RPAP3-207ENST00000551293 FAM212BQ9NTI7 297 aaPredicted RBP13.14□□□□□ -0.31
RPAP3-207ENST00000551293 YTHDF2Q9Y5A9 579 aaKnown RBP13.14□□□□□ -0.31
RPAP3-207ENST00000551293 HLA-DRB4X5D2U9 266 aa13.14□□□□□ -0.31
RPAP3-207ENST00000551293 SCGB2A1O75556 95 aa13.13□□□□□ -0.31
RPAP3-207ENST00000551293 IL4P05112 153 aa13.13□□□□□ -0.31
RPAP3-207ENST00000551293 PRSS3P35030 304 aa13.13□□□□□ -0.31
RPAP3-207ENST00000551293 RND2P52198 227 aa13.13□□□□□ -0.31
RPAP3-207ENST00000551293 AP2S1P53680 142 aaPredicted RBP13.13□□□□□ -0.31
RPAP3-207ENST00000551293 SIGLEC15Q6ZMC9 328 aa13.13□□□□□ -0.31
RPAP3-207ENST00000551293 SAMD12Q8N8I0 201 aa13.13□□□□□ -0.31
RPAP3-207ENST00000551293 Q8WTZ3 238 aa13.13□□□□□ -0.31
RPAP3-207ENST00000551293 ATG101Q9BSB4 218 aa13.13□□□□□ -0.31
RPAP3-207ENST00000551293 SLC35B3Q9H1N7 401 aa13.13□□□□□ -0.31
RPAP3-207ENST00000551293 SMIM9A6NGZ8 99 aa13.12□□□□□ -0.31
RPAP3-207ENST00000551293 IGLC1P0CG04 106 aa13.12□□□□□ -0.31
RPAP3-207ENST00000551293 PGAM2P15259 253 aa13.12□□□□□ -0.31
RPAP3-207ENST00000551293 UBE2NLQ5JXB2 153 aa13.12□□□□□ -0.31
RPAP3-207ENST00000551293 OR4B1Q8NGF8 309 aa13.12□□□□□ -0.31
RPAP3-207ENST00000551293 TP53RKQ96S44 253 aa13.12□□□□□ -0.31
RPAP3-207ENST00000551293 TRAV30A0A087WSZ9 112 aa13.11□□□□□ -0.31
RPAP3-207ENST00000551293 A0A0G2JRQ6 117 aa13.11□□□□□ -0.31
RPAP3-207ENST00000551293 LOC102723971A0A1B0GUV8 181 aa13.11□□□□□ -0.31
RPAP3-207ENST00000551293 INS-IGF2F8WCM5 200 aa13.11□□□□□ -0.31
RPAP3-207ENST00000551293 P0C879 139 aa13.11□□□□□ -0.31
RPAP3-207ENST00000551293 OR10J1P30954 320 aa13.11□□□□□ -0.31
RPAP3-207ENST00000551293 DAD1P61803 113 aa13.11□□□□□ -0.31
RPAP3-207ENST00000551293 SP6Q3SY56 376 aa13.11□□□□□ -0.31
RPAP3-207ENST00000551293 PRSS54Q6PEW0 395 aa13.11□□□□□ -0.31
RPAP3-207ENST00000551293 C6orf223Q8N319 242 aa13.11□□□□□ -0.31
RPAP3-207ENST00000551293 FCGR1BQ92637 280 aa13.11□□□□□ -0.31
RPAP3-207ENST00000551293 C7orf50Q9BRJ6 194 aaKnown RBP13.11□□□□□ -0.31
RPAP3-207ENST00000551293 NBDYA0A0U1RRE5 68 aa13.1□□□□□ -0.31
RPAP3-207ENST00000551293 M0QYG6 137 aa13.1□□□□□ -0.31
RPAP3-207ENST00000551293 RPL5P46777 297 aaKnown RBP13.1□□□□□ -0.31
RPAP3-207ENST00000551293 SPATA12Q7Z6I5 190 aa13.1□□□□□ -0.31
RPAP3-207ENST00000551293 ZNF709Q8N972 641 aa13.1□□□□□ -0.31
RPAP3-207ENST00000551293 OR1S2Q8NGQ3 325 aa13.1□□□□□ -0.31
RPAP3-207ENST00000551293 WDR12Q9GZL7 423 aaKnown RBP13.1□□□□□ -0.31
RPAP3-207ENST00000551293 F6UB75 175 aa13.09□□□□□ -0.31
RPAP3-207ENST00000551293 BUB3O43684 328 aa13.09□□□□□ -0.31
RPAP3-207ENST00000551293 HBE1P02100 147 aa13.09□□□□□ -0.31
RPAP3-207ENST00000551293 PRM2P04554 102 aa13.09□□□□□ -0.31
RPAP3-207ENST00000551293 NKX2-1P43699 371 aaPredicted RBP13.09□□□□□ -0.31
RPAP3-207ENST00000551293 TRIM16LQ309B1 348 aa13.09□□□□□ -0.31
RPAP3-207ENST00000551293 C1orf158Q8N1D5 194 aa13.09□□□□□ -0.31
RPAP3-207ENST00000551293 RNASE11Q8TAA1 199 aaKnown RBP13.09□□□□□ -0.31
RPAP3-207ENST00000551293 TEX48A0A1B0GUV7 120 aa13.08□□□□□ -0.32
RPAP3-207ENST00000551293 UCP3P55916 312 aa13.08□□□□□ -0.32
RPAP3-207ENST00000551293 PIGPP57054 158 aa13.08□□□□□ -0.32
RPAP3-207ENST00000551293 BSXQ3C1V8 233 aa13.08□□□□□ -0.32
RPAP3-207ENST00000551293 RNASE12Q5GAN4 147 aaKnown RBP13.08□□□□□ -0.32
RPAP3-207ENST00000551293 SNX29P2Q8IUI4 249 aa13.08□□□□□ -0.32
RPAP3-207ENST00000551293 OR51G1Q8NGK1 321 aa13.08□□□□□ -0.32
RPAP3-207ENST00000551293 GPX8Q8TED1 209 aa13.08□□□□□ -0.32
RPAP3-207ENST00000551293 ACY3Q96HD9 319 aa13.08□□□□□ -0.32
RPAP3-207ENST00000551293 SAV1Q9H4B6 383 aaPredicted RBP13.08□□□□□ -0.32
RPAP3-207ENST00000551293 GOLT1BQ9Y3E0 138 aa13.08□□□□□ -0.32
RPAP3-207ENST00000551293 RPS10-NUDT3A0A1W2PQS6 291 aa13.07□□□□□ -0.32
RPAP3-207ENST00000551293 NUDT3O95989 172 aa13.07□□□□□ -0.32
RPAP3-207ENST00000551293 YPEL3P61236 119 aaPredicted RBP13.07□□□□□ -0.32
RPAP3-207ENST00000551293 OXA1LQ15070 435 aa13.07□□□□□ -0.32
RPAP3-207ENST00000551293 NEDD8Q15843 81 aa13.07□□□□□ -0.32
RPAP3-207ENST00000551293 ZNRF2Q8NHG8 242 aa13.07□□□□□ -0.32
RPAP3-207ENST00000551293 NPIPB3Q92617 1050 aa13.07□□□□□ -0.32
RPAP3-207ENST00000551293 PBDC1Q9BVG4 233 aa13.07□□□□□ -0.32
RPAP3-207ENST00000551293 VCX3BQ9H321 246 aa13.07□□□□□ -0.32
RPAP3-207ENST00000551293 HEYLQ9NQ87 328 aaPredicted RBP13.07□□□□□ -0.32
RPAP3-207ENST00000551293 C3orf85A0A1B0GTC6 90 aa13.06□□□□□ -0.32
RPAP3-207ENST00000551293 NXPH3O95157 252 aa13.06□□□□□ -0.32
RPAP3-207ENST00000551293 RD3LP0DJH9 198 aa13.06□□□□□ -0.32
RPAP3-207ENST00000551293 RORCP51449 518 aa13.06□□□□□ -0.32
RPAP3-207ENST00000551293 RRN3P1Q2M238 152 aa13.06□□□□□ -0.32
RPAP3-207ENST00000551293 COQ8AQ8NI60 647 aa13.06□□□□□ -0.32
RPAP3-207ENST00000551293 SEPSECSQ9HD40 501 aaKnown RBP13.06□□□□□ -0.32
RPAP3-207ENST00000551293 RCVRNP35243 200 aa13.05□□□□□ -0.32
RPAP3-207ENST00000551293 RPS19P39019 145 aaKnown RBP13.05□□□□□ -0.32
RPAP3-207ENST00000551293 HTR2BP41595 481 aa13.05□□□□□ -0.32
RPAP3-207ENST00000551293 LSM3P62310 102 aaKnown RBP13.05□□□□□ -0.32
RPAP3-207ENST00000551293 PSG9Q00887 426 aa13.05□□□□□ -0.32
RPAP3-207ENST00000551293 FAM78BQ5VT40 261 aa13.05□□□□□ -0.32
RPAP3-207ENST00000551293 FOXI2Q6ZQN5 318 aa13.05□□□□□ -0.32
RPAP3-207ENST00000551293 C15orf53Q8NAA6 179 aa13.05□□□□□ -0.32
RPAP3-207ENST00000551293 RRNAD1Q96FB5 475 aaKnown RBP13.05□□□□□ -0.32
RPAP3-207ENST00000551293 MAGT1Q9H0U3 335 aa13.05□□□□□ -0.32
RPAP3-207ENST00000551293 RAB26Q9ULW5 256 aa13.05□□□□□ -0.32
RPAP3-207ENST00000551293 TOMM40O96008 361 aa13.04□□□□□ -0.32
RPAP3-207ENST00000551293 DEFB130BP0DP73 79 aa13.04□□□□□ -0.32
RPAP3-207ENST00000551293 DEFB130AP0DP74 79 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms