RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 DNAH2Q9P225 4427 aa9.28□□□□□ -0.92
PTCH1-221ENST00000550914 TNFAIP8O95379 198 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 HNRNPCP07910 306 aaKnown RBP eCLIP9.27□□□□□ -0.93
PTCH1-221ENST00000550914 IGLC1P0CG04 106 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 RORCP51449 518 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 NCS1P62166 190 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 SNRPD3P62318 126 aaKnown RBP9.27□□□□□ -0.93
PTCH1-221ENST00000550914 DHRS2Q13268 280 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 C2orf83Q53S99 150 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 MZT2AQ6P582 158 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 C16orf54Q6UWD8 224 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 RNASE11Q8TAA1 199 aaKnown RBP9.27□□□□□ -0.93
PTCH1-221ENST00000550914 Q8WTZ3 238 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 C15orf40Q8WUR7 153 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 GLMPQ8WWB7 406 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 FUNDC2Q9BWH2 189 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.27□□□□□ -0.93
PTCH1-221ENST00000550914 MTFP1Q9UDX5 166 aa9.27□□□□□ -0.93
PTCH1-221ENST00000550914 DEFB131BA0A096LNP1 70 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 A0A0G2JRQ6 117 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 GSTZ1O43708 216 aaPredicted RBP9.26□□□□□ -0.93
PTCH1-221ENST00000550914 CDS2O95674 445 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 CD74P04233 296 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 P0DMU3 169 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 FAM231AP0DMU4 169 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 FAM231CP0DMU5 169 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 OR10J1P30954 320 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 VBP1P61758 197 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 C12orf74Q32Q52 190 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 SP6Q3SY56 376 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 PSMG4Q5JS54 123 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 ETFRF1Q6IPR1 90 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 PRSS54Q6PEW0 395 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 Q6ZRM9 215 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 OR13C8Q8NGS7 320 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 OR52I2Q8NH67 350 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 AP3S1Q92572 193 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 ABHD1Q96SE0 405 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 TMEM222Q9H0R3 208 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 NRN1Q9NPD7 142 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 CLEC5AQ9NY25 188 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 CACFD1Q9UGQ2 172 aa9.26□□□□□ -0.93
PTCH1-221ENST00000550914 A0A1B0GVY2 172 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 FAM25AB3EWG3 89 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 FAM25CB3EWG5 89 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 FAM25GB3EWG6 89 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 FAM90A26D6RGX4 464 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 NPY1RP25929 384 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 RND2P52198 227 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 TAS2R19P59542 299 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 NOXA1Q86UR1 476 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 POM121L12Q8N7R1 296 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 TMEM229BQ8NBD8 167 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 RBPMSQ93062 196 aaKnown RBP9.25□□□□□ -0.93
PTCH1-221ENST00000550914 NEU1Q99519 415 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 NDUFAF3Q9BU61 184 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 HEYLQ9NQ87 328 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-221ENST00000550914 CELA1Q9UNI1 258 aa9.25□□□□□ -0.93
PTCH1-221ENST00000550914 H3BMM0 161 aa9.24□□□□□ -0.93
PTCH1-221ENST00000550914 RAB3DO95716 219 aa9.24□□□□□ -0.93
PTCH1-221ENST00000550914 NUP62P37198 522 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-221ENST00000550914 DHODHQ02127 395 aa9.24□□□□□ -0.93
PTCH1-221ENST00000550914 SSBP1Q04837 148 aaKnown RBP9.24□□□□□ -0.93
PTCH1-221ENST00000550914 SURF2Q15527 256 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-221ENST00000550914 SCGB2B2Q4G0G5 96 aa9.24□□□□□ -0.93
PTCH1-221ENST00000550914 SLC24A4Q8NFF2 622 aa9.24□□□□□ -0.93
PTCH1-221ENST00000550914 OR4D10Q8NGI6 311 aa9.24□□□□□ -0.93
PTCH1-221ENST00000550914 MARCH1Q8TCQ1 289 aa9.24□□□□□ -0.93
PTCH1-221ENST00000550914 GLYATL2Q8WU03 294 aa9.24□□□□□ -0.93
PTCH1-221ENST00000550914 PKD1P98161 4303 aa9.24□□□□□ -0.93
PTCH1-221ENST00000550914 TEX13DA0A0J9YY54 714 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-221ENST00000550914 TMEM189A5PLL7 270 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 SMIM9A6NGZ8 99 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 BUB3O43684 328 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 TOMM40O96008 361 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 IL4P05112 153 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 OR5AC1P0C628 307 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 HLA-DRB4P13762 266 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 ZNF182P17025 639 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-221ENST00000550914 NKX2-1P43699 371 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-221ENST00000550914 USF2Q15853 346 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-221ENST00000550914 RNASE12Q5GAN4 147 aaKnown RBP9.23□□□□□ -0.93
PTCH1-221ENST00000550914 STEAP1BQ6NZ63 245 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 SIGLEC15Q6ZMC9 328 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 ZNF705AQ6ZN79 300 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-221ENST00000550914 FAM210BQ96KR6 192 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 NAA60Q9H7X0 242 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 XCL2Q9UBD3 114 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 EXTL2Q9UBQ6 330 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 CACNG5Q9UF02 275 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 C14orf166Q9Y224 244 aaKnown RBP9.23□□□□□ -0.93
PTCH1-221ENST00000550914 HLA-DRB4X5D2U9 266 aa9.23□□□□□ -0.93
PTCH1-221ENST00000550914 CEBPZOSA8MTT3 80 aa9.22□□□□□ -0.93
PTCH1-221ENST00000550914 ZNF705FA8MVS1 300 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-221ENST00000550914 GABARAPH6UMI1 98 aa9.22□□□□□ -0.93
PTCH1-221ENST00000550914 GABARAPO95166 117 aa9.22□□□□□ -0.93
PTCH1-221ENST00000550914 ZNF705DP0CH99 300 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-221ENST00000550914 ZNF705BP0CI00 300 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-221ENST00000550914 RD3LP0DJH9 198 aa9.22□□□□□ -0.93
PTCH1-221ENST00000550914 MED14OSP0DP75 135 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms