RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, human

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP1A-208	ENST00000550102	CD5	P06127	495 aa		12.86	□□□□□ -0.35
CHMP1A-208	ENST00000550102	OR4E1	P0C645	316 aa		12.86	□□□□□ -0.35
CHMP1A-208	ENST00000550102	DHRS2	Q13268	280 aa		12.86	□□□□□ -0.35
CHMP1A-208	ENST00000550102	CNPY1	Q3B7I2	92 aa		12.86	□□□□□ -0.35
CHMP1A-208	ENST00000550102	GGNBP1	Q5YKI7	109 aa		12.86	□□□□□ -0.35
CHMP1A-208	ENST00000550102	LINC00299	Q6ZSB3	139 aa		12.86	□□□□□ -0.35
CHMP1A-208	ENST00000550102	LYG2	Q86SG7	212 aa		12.86	□□□□□ -0.35
CHMP1A-208	ENST00000550102	COQ8A	Q8NI60	647 aa		12.86	□□□□□ -0.35
CHMP1A-208	ENST00000550102	ST8SIA2	Q92186	375 aa		12.86	□□□□□ -0.35
CHMP1A-208	ENST00000550102	ACY3	Q96HD9	319 aa		12.86	□□□□□ -0.35
CHMP1A-208	ENST00000550102	METTL26	Q96S19	204 aa		12.86	□□□□□ -0.35
CHMP1A-208	ENST00000550102	CCDC32	Q9BV29	185 aa		12.86	□□□□□ -0.35
CHMP1A-208	ENST00000550102	LYRM1	O43325	122 aa		12.85	□□□□□ -0.35
CHMP1A-208	ENST00000550102	IAPP	P10997	89 aa		12.85	□□□□□ -0.35
CHMP1A-208	ENST00000550102	ODF3L2	Q3SX64	289 aa		12.85	□□□□□ -0.35
CHMP1A-208	ENST00000550102	C4orf46	Q504U0	113 aa		12.85	□□□□□ -0.35
CHMP1A-208	ENST00000550102	TCF24	Q7RTU0	167 aa		12.85	□□□□□ -0.35
CHMP1A-208	ENST00000550102	NARS2	Q96I59	477 aa	Known RBP	12.85	□□□□□ -0.35
CHMP1A-208	ENST00000550102	CIB3	Q96Q77	187 aa	Predicted RBP	12.85	□□□□□ -0.35
CHMP1A-208	ENST00000550102	FAM110A	Q9BQ89	295 aa		12.85	□□□□□ -0.35
CHMP1A-208	ENST00000550102	GGTLC1	Q9BX51	225 aa		12.85	□□□□□ -0.35
CHMP1A-208	ENST00000550102	VSIR	Q9H7M9	311 aa		12.85	□□□□□ -0.35
CHMP1A-208	ENST00000550102	UBQLN2	Q9UHD9	624 aa		12.85	□□□□□ -0.35
CHMP1A-208	ENST00000550102	ANXA7	P20073	488 aa	Known RBP	12.84	□□□□□ -0.35
CHMP1A-208	ENST00000550102	NPPC	P23582	126 aa		12.84	□□□□□ -0.35
CHMP1A-208	ENST00000550102	YPEL3	P61236	119 aa	Predicted RBP	12.84	□□□□□ -0.35
CHMP1A-208	ENST00000550102	FAM90A2P	Q658T7	463 aa		12.84	□□□□□ -0.35
CHMP1A-208	ENST00000550102	NPIPB3	Q92617	1050 aa		12.84	□□□□□ -0.35
CHMP1A-208	ENST00000550102	CITED4	Q96RK1	184 aa		12.84	□□□□□ -0.35
CHMP1A-208	ENST00000550102	C20orf85	Q9H1P6	137 aa		12.84	□□□□□ -0.35
CHMP1A-208	ENST00000550102	IGKV3-7	A0A075B6H7	116 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102		A0A1W2PS18	150 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	PLA2G10	O15496	165 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	SYNGR2	O43760	224 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	ADAP1	O75689	374 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	IFNA21	P01568	189 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	APOH	P02749	345 aa	Predicted RBP	12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	RAB11A	P62491	216 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	PAFAH1B2	P68402	229 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102		Q8WTZ3	238 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	S100Z	Q8WXG8	99 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	SLC35E1	Q96K37	410 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	MAGT1	Q9H0U3	335 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	RETN	Q9HD89	108 aa		12.83	□□□□□ -0.36
CHMP1A-208	ENST00000550102	IGHV3-66	A0A0C4DH42	116 aa		12.82	□□□□□ -0.36
CHMP1A-208	ENST00000550102	CRYBB3	P26998	211 aa		12.82	□□□□□ -0.36
CHMP1A-208	ENST00000550102	GPX4	P36969	197 aa	Predicted RBP	12.82	□□□□□ -0.36
CHMP1A-208	ENST00000550102	TFPI2	P48307	235 aa		12.82	□□□□□ -0.36
CHMP1A-208	ENST00000550102	RPP30	P78346	268 aa	Known RBP	12.82	□□□□□ -0.36
CHMP1A-208	ENST00000550102	MUC7	Q8TAX7	377 aa		12.82	□□□□□ -0.36
CHMP1A-208	ENST00000550102	GRAMD2B	Q96HH9	432 aa		12.82	□□□□□ -0.36
CHMP1A-208	ENST00000550102	PAIP2B	Q9ULR5	123 aa	Known RBP	12.82	□□□□□ -0.36
CHMP1A-208	ENST00000550102	DFFB	O76075	338 aa		12.81	□□□□□ -0.36
CHMP1A-208	ENST00000550102	TOMM40	O96008	361 aa		12.81	□□□□□ -0.36
CHMP1A-208	ENST00000550102	P2RY1	P47900	373 aa		12.81	□□□□□ -0.36
CHMP1A-208	ENST00000550102	RPL11	P62913	178 aa	Known RBP	12.81	□□□□□ -0.36
CHMP1A-208	ENST00000550102	GBGT1	Q8N5D6	347 aa		12.81	□□□□□ -0.36
CHMP1A-208	ENST00000550102	TRAV2	A0A0B4J234	112 aa		12.8	□□□□□ -0.36
CHMP1A-208	ENST00000550102		A6NHS1	94 aa		12.8	□□□□□ -0.36
CHMP1A-208	ENST00000550102	C3orf84	H3BNL1	204 aa		12.8	□□□□□ -0.36
CHMP1A-208	ENST00000550102	WRB	O00258	174 aa		12.8	□□□□□ -0.36
CHMP1A-208	ENST00000550102	IL4	P05112	153 aa		12.8	□□□□□ -0.36
CHMP1A-208	ENST00000550102	HNRNPC	P07910	306 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
CHMP1A-208	ENST00000550102	RD3L	P0DJH9	198 aa		12.8	□□□□□ -0.36
CHMP1A-208	ENST00000550102	APOC4	P55056	127 aa		12.8	□□□□□ -0.36
CHMP1A-208	ENST00000550102	CMC4	P56277	68 aa	Predicted RBP	12.8	□□□□□ -0.36
CHMP1A-208	ENST00000550102	MS4A6A	Q9H2W1	248 aa		12.8	□□□□□ -0.36
CHMP1A-208	ENST00000550102	NUDT15	Q9NV35	164 aa		12.8	□□□□□ -0.36
CHMP1A-208	ENST00000550102	PTTG2	Q9NZH5	202 aa		12.8	□□□□□ -0.36
CHMP1A-208	ENST00000550102	ZFP92	A6NM28	416 aa		12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	MPTX1	A8MV57	137 aa		12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	DNASE2	O00115	360 aa	Predicted RBP	12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	TCRB	P04435	133 aa		12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	FABP1	P07148	127 aa		12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	EIF2B2	P49770	351 aa	Known RBP	12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	GAMT	Q14353	236 aa		12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	USF2	Q15853	346 aa	Predicted RBP	12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	LILRB2	Q8N423	598 aa		12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	MITD1	Q8WV92	249 aa		12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	MAP6D1	Q9H9H5	199 aa		12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	EDA2R	Q9HAV5	297 aa		12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	DNAH7	Q8WXX0	4024 aa		12.79	□□□□□ -0.36
CHMP1A-208	ENST00000550102	TRAV6	A0A075B6T7	132 aa		12.78	□□□□□ -0.36
CHMP1A-208	ENST00000550102		H3BP45	60 aa		12.78	□□□□□ -0.36
CHMP1A-208	ENST00000550102	NKX2-1	P43699	371 aa	Predicted RBP	12.78	□□□□□ -0.36
CHMP1A-208	ENST00000550102	SPANXN5	Q5MJ07	72 aa		12.78	□□□□□ -0.36
CHMP1A-208	ENST00000550102	STXBP6	Q8NFX7	210 aa		12.78	□□□□□ -0.36
CHMP1A-208	ENST00000550102	OR51G1	Q8NGK1	321 aa		12.78	□□□□□ -0.36
CHMP1A-208	ENST00000550102	OR4D5	Q8NGN0	318 aa		12.78	□□□□□ -0.36
CHMP1A-208	ENST00000550102	WDR12	Q9GZL7	423 aa	Known RBP	12.78	□□□□□ -0.36
CHMP1A-208	ENST00000550102	RABAC1	Q9UI14	185 aa		12.78	□□□□□ -0.36
CHMP1A-208	ENST00000550102	STRAP	Q9Y3F4	350 aa	Known RBP	12.78	□□□□□ -0.36
CHMP1A-208	ENST00000550102	KIR2DL5B	A0A0G2JN68	375 aa		12.77	□□□□□ -0.37
CHMP1A-208	ENST00000550102	KIR2DL5B	A0A0G2JPC4	375 aa		12.77	□□□□□ -0.37
CHMP1A-208	ENST00000550102	HELT	A6NFD8	242 aa		12.77	□□□□□ -0.37
CHMP1A-208	ENST00000550102	SSSCA1	O60232	199 aa		12.77	□□□□□ -0.37
CHMP1A-208	ENST00000550102	PSG1	P11464	419 aa		12.77	□□□□□ -0.37
CHMP1A-208	ENST00000550102	NUP62	P37198	522 aa	Predicted RBP	12.77	□□□□□ -0.37
CHMP1A-208	ENST00000550102	POLR2G	P62487	172 aa	Known RBP eCLIP	12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms