RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 OR10J1P30954 320 aa19.54■□□□□ 0.72
CPSF6-205ENST00000550075 ZNF414Q96IQ9 312 aa19.54■□□□□ 0.72
CPSF6-205ENST00000550075 NEURL2Q9BR09 285 aa19.54■□□□□ 0.72
CPSF6-205ENST00000550075 SEC22CQ9BRL7 303 aa19.54■□□□□ 0.72
CPSF6-205ENST00000550075 SELENOKQ9Y6D0 94 aa19.54■□□□□ 0.72
CPSF6-205ENST00000550075 SCAF4O95104 1147 aaKnown RBP19.53■□□□□ 0.72
CPSF6-205ENST00000550075 IGLC1P0CG04 106 aa19.53■□□□□ 0.72
CPSF6-205ENST00000550075 NHLRC4P0CG21 123 aaPredicted RBP19.53■□□□□ 0.72
CPSF6-205ENST00000550075 IGHV4-30-4P0DP06 118 aa19.53■□□□□ 0.72
CPSF6-205ENST00000550075 GPX4P36969 197 aaPredicted RBP19.53■□□□□ 0.72
CPSF6-205ENST00000550075 ID3Q02535 119 aa19.53■□□□□ 0.72
CPSF6-205ENST00000550075 TIGITQ495A1 244 aa19.53■□□□□ 0.72
CPSF6-205ENST00000550075 OR4D5Q8NGN0 318 aa19.53■□□□□ 0.72
CPSF6-205ENST00000550075 SPAG8Q99932 426 aaPredicted RBP19.53■□□□□ 0.72
CPSF6-205ENST00000550075 ZFAND3Q9H8U3 227 aa19.53■□□□□ 0.72
CPSF6-205ENST00000550075 A8MZ25 164 aa19.52■□□□□ 0.72
CPSF6-205ENST00000550075 IGKV1-17P01599 117 aa19.52■□□□□ 0.72
CPSF6-205ENST00000550075 FRMD6-AS1P0C7T7 363 aa19.52■□□□□ 0.72
CPSF6-205ENST00000550075 C12orf45Q8N5I9 185 aaPredicted RBP19.52■□□□□ 0.72
CPSF6-205ENST00000550075 ZBTB8BQ8NAP8 495 aaPredicted RBP19.52■□□□□ 0.72
CPSF6-205ENST00000550075 NPIPB3Q92617 1050 aa19.52■□□□□ 0.72
CPSF6-205ENST00000550075 RHPN1-AS1Q9BWJ2 59 aa19.52■□□□□ 0.72
CPSF6-205ENST00000550075 TMEM231Q9H6L2 316 aa19.52■□□□□ 0.72
CPSF6-205ENST00000550075 TUBA4BQ9H853 241 aa19.52■□□□□ 0.72
CPSF6-205ENST00000550075 STRAPQ9Y3F4 350 aaKnown RBP19.52■□□□□ 0.72
CPSF6-205ENST00000550075 TSPAN4O14817 238 aa19.51■□□□□ 0.71
CPSF6-205ENST00000550075 SCGB1D2O95969 90 aa19.51■□□□□ 0.71
CPSF6-205ENST00000550075 YPEL3P61236 119 aaPredicted RBP19.51■□□□□ 0.71
CPSF6-205ENST00000550075 Q8WTZ3 238 aa19.51■□□□□ 0.71
CPSF6-205ENST00000550075 NARS2Q96I59 477 aaKnown RBP19.51■□□□□ 0.71
CPSF6-205ENST00000550075 GPN1Q9HCN4 374 aaPredicted RBP19.51■□□□□ 0.71
CPSF6-205ENST00000550075 CHEK1O14757 476 aa19.5■□□□□ 0.71
CPSF6-205ENST00000550075 SSSCA1O60232 199 aa19.5■□□□□ 0.71
CPSF6-205ENST00000550075 IL5P05113 134 aa19.5■□□□□ 0.71
CPSF6-205ENST00000550075 CD5P06127 495 aa19.5■□□□□ 0.71
CPSF6-205ENST00000550075 POLR2GP62487 172 aaKnown RBP eCLIP19.5■□□□□ 0.71
CPSF6-205ENST00000550075 IFITM3Q01628 133 aa19.5■□□□□ 0.71
CPSF6-205ENST00000550075 SPANXN5Q5MJ07 72 aa19.5■□□□□ 0.71
CPSF6-205ENST00000550075 METTL26Q96S19 204 aa19.5■□□□□ 0.71
CPSF6-205ENST00000550075 GSKIPQ9P0R6 139 aa19.5■□□□□ 0.71
CPSF6-205ENST00000550075 IGHV3-49A0A0A0MS15 119 aa19.48■□□□□ 0.71
CPSF6-205ENST00000550075 A0A1W2PS18 150 aa19.48■□□□□ 0.71
CPSF6-205ENST00000550075 OR4C46A6NHA9 309 aa19.48■□□□□ 0.71
CPSF6-205ENST00000550075 FAM25EA8MYX2 175 aa19.48■□□□□ 0.71
CPSF6-205ENST00000550075 H3BP45 60 aa19.48■□□□□ 0.71
CPSF6-205ENST00000550075 FABP1P07148 127 aa19.48■□□□□ 0.71
CPSF6-205ENST00000550075 CD7P09564 240 aa19.48■□□□□ 0.71
CPSF6-205ENST00000550075 NPPCP23582 126 aa19.48■□□□□ 0.71
CPSF6-205ENST00000550075 RAB40CQ96S21 281 aa19.48■□□□□ 0.71
CPSF6-205ENST00000550075 C19orf73Q9NVV2 129 aa19.48■□□□□ 0.71
CPSF6-205ENST00000550075 C5orf51A6NDU8 294 aa19.47■□□□□ 0.71
CPSF6-205ENST00000550075 ZFP92A6NM28 416 aa19.47■□□□□ 0.71
CPSF6-205ENST00000550075 CCSO14618 274 aa19.47■□□□□ 0.71
CPSF6-205ENST00000550075 PRAF2O60831 178 aa19.47■□□□□ 0.71
CPSF6-205ENST00000550075 GAMTQ14353 236 aa19.47■□□□□ 0.71
CPSF6-205ENST00000550075 NRARPQ7Z6K4 114 aa19.47■□□□□ 0.71
CPSF6-205ENST00000550075 RNF2Q99496 336 aa19.47■□□□□ 0.71
CPSF6-205ENST00000550075 ASCL2Q99929 193 aa19.47■□□□□ 0.71
CPSF6-205ENST00000550075 PSENENQ9NZ42 101 aa19.47■□□□□ 0.71
CPSF6-205ENST00000550075 OR11H12B2RN74 326 aa19.46■□□□□ 0.71
CPSF6-205ENST00000550075 TOMM40O96008 361 aa19.46■□□□□ 0.71
CPSF6-205ENST00000550075 SMIM8Q96KF7 97 aa19.46■□□□□ 0.71
CPSF6-205ENST00000550075 VSIRQ9H7M9 311 aa19.46■□□□□ 0.71
CPSF6-205ENST00000550075 IGHV3OR16-13A0A075B7E8 117 aa19.45■□□□□ 0.7
CPSF6-205ENST00000550075 IGHV3-74A0A0B4J1X5 117 aa19.45■□□□□ 0.7
CPSF6-205ENST00000550075 RD3LP0DJH9 198 aa19.45■□□□□ 0.7
CPSF6-205ENST00000550075 TAS2R30P59541 319 aa19.45■□□□□ 0.7
CPSF6-205ENST00000550075 GRAMD2BQ96HH9 432 aa19.45■□□□□ 0.7
CPSF6-205ENST00000550075 INMT-MINDY4F8WBC2 141 aa19.44■□□□□ 0.7
CPSF6-205ENST00000550075 IL4P05112 153 aa19.44■□□□□ 0.7
CPSF6-205ENST00000550075 CRYBB3P26998 211 aa19.44■□□□□ 0.7
CPSF6-205ENST00000550075 GSG1LQ6UXU4 331 aa19.44■□□□□ 0.7
CPSF6-205ENST00000550075 ST8SIA2Q92186 375 aa19.44■□□□□ 0.7
CPSF6-205ENST00000550075 DNAH9Q9NYC9 4486 aa19.43■□□□□ 0.7
CPSF6-205ENST00000550075 COL7A1Q02388 2944 aa19.43■□□□□ 0.7
CPSF6-205ENST00000550075 PAFAH1B2P68402 229 aa19.43■□□□□ 0.7
CPSF6-205ENST00000550075 TCF24Q7RTU0 167 aa19.43■□□□□ 0.7
CPSF6-205ENST00000550075 SBSPONQ8IVN8 264 aa19.43■□□□□ 0.7
CPSF6-205ENST00000550075 DEFB125Q8N687 156 aa19.43■□□□□ 0.7
CPSF6-205ENST00000550075 OR51G1Q8NGK1 321 aa19.43■□□□□ 0.7
CPSF6-205ENST00000550075 C2orf50Q96LR7 162 aa19.43■□□□□ 0.7
CPSF6-205ENST00000550075 SRD5A3Q9H8P0 318 aa19.43■□□□□ 0.7
CPSF6-205ENST00000550075 RCL1Q9Y2P8 373 aaKnown RBP19.43■□□□□ 0.7
CPSF6-205ENST00000550075 SNRPGP15A8MWD9 76 aa19.42■□□□□ 0.7
CPSF6-205ENST00000550075 L7N2F9 121 aa19.42■□□□□ 0.7
CPSF6-205ENST00000550075 TSC22D2O75157 780 aa19.42■□□□□ 0.7
CPSF6-205ENST00000550075 MBPP02686 304 aaPredicted RBP19.42■□□□□ 0.7
CPSF6-205ENST00000550075 HNRNPCP07910 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
CPSF6-205ENST00000550075 VAMP2P63027 116 aa19.42■□□□□ 0.7
CPSF6-205ENST00000550075 AKR1C1Q04828 323 aa19.42■□□□□ 0.7
CPSF6-205ENST00000550075 ZMAT4Q9H898 229 aa19.42■□□□□ 0.7
CPSF6-205ENST00000550075 PRSS46E5RG02 174 aa19.41■□□□□ 0.7
CPSF6-205ENST00000550075 PSG1P11464 419 aa19.41■□□□□ 0.7
CPSF6-205ENST00000550075 NUP62P37198 522 aaPredicted RBP19.41■□□□□ 0.7
CPSF6-205ENST00000550075 EIF2B2P49770 351 aaKnown RBP19.41■□□□□ 0.7
CPSF6-205ENST00000550075 ACOT7LQ6ZUV0 252 aa19.41■□□□□ 0.7
CPSF6-205ENST00000550075 TRGV9Q99603 122 aa19.41■□□□□ 0.7
CPSF6-205ENST00000550075 MARVELD1Q9BSK0 173 aa19.41■□□□□ 0.7
CPSF6-205ENST00000550075 WFDC10AQ9H1F0 79 aa19.41■□□□□ 0.7
CPSF6-205ENST00000550075 PFDN2Q9UHV9 154 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms