RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 TEPPQ6URK8 271 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 UBAC2Q8NBM4 344 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 TMEM170AQ8WVE7 144 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 ACY3Q96HD9 319 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 ATP5SQ99766 215 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 PARD6GQ9BYG4 376 aaPredicted RBP7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 MFFQ9GZY8 342 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 DMRT1Q9Y5R6 373 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 A0A1B0GVG6 124 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 MFSD2BA6NFX1 497 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 ZFP92A6NM28 416 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 PMS2P5A8MQ11 134 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 PRSS46E5RG02 174 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 C17orf112F2Z3M2 114 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 IGHV3-11P01762 117 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 CLEC3BP05452 202 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 OR10J1P30954 320 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 GPR183P32249 361 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 YPEL3P61236 119 aaPredicted RBP7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 KIAA0141Q14154 515 aaPredicted RBP7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 GAMTQ14353 236 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 VWC2Q2TAL6 325 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 TCTEX1D4Q5JR98 221 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 PXDC1Q5TGL8 231 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 C10orf99Q6UWK7 81 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 CLEC19AQ6UXS0 136 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 ZNF600Q6ZNG1 722 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 TMEM217Q8N7C4 229 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 ZNF709Q8N972 641 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 THAP8Q8NA92 274 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 OR5C1Q8NGR4 320 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 SCGB1C1Q8TD33 95 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 Q8WTZ3 238 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 NPIPB3Q92617 1050 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 TAF15Q92804 592 aaKnown RBP eCLIP7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 TRGV9Q99603 122 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 GINS3Q9BRX5 216 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 GPR61Q9BZJ8 451 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 FNDC4Q9H6D8 234 aaPredicted RBP7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 PEMTQ9UBM1 199 aa7.56□□□□□ -1.2
SMARCD1-206ENST00000549274 COL6A5A8TX70 2615 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 KANTRA0A1W2PQU2 76 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 OR2T8A6NH00 312 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 CCL24O00175 119 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 NDUFA4O00483 81 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 ARPC5O15511 151 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 JTBO76095 146 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 ELLP55199 621 aaPredicted RBP7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 SUMO1P63165 101 aaKnown RBP7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 NHLH2Q02577 135 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 NSUN5P1Q3KNT7 163 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 SAMD5Q5TGI4 173 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 C19orf35Q6ZS72 473 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 LCNL1Q6ZST4 164 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 GPHB5Q86YW7 130 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 C11orf44Q8N8P7 122 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 BPIFCQ8NFQ6 507 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 OR1N2Q8NGR9 330 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 SPATA3Q8NHX4 192 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 NARS2Q96I59 477 aaKnown RBP7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 CCDC140Q96MF4 163 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 NEURL2Q9BR09 285 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 GNB4Q9HAV0 340 aa7.55□□□□□ -1.2
SMARCD1-206ENST00000549274 UBE2L5PA0A1B0GUS4 154 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 A0A1W2PRX2 142 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 G3V3Q6 166 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 LGALS9O00182 355 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 BMPR1BO00238 502 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 TOMM40O96008 361 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 IGLC1P0CG04 106 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 FHL3Q13643 280 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 C8orf86Q6ZUL3 223 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 C1QL4Q86Z23 238 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 KCNRGQ8N5I3 272 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 OR11H1Q8NG94 326 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 OR51G1Q8NGK1 321 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 MARC2Q969Z3 335 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 MCRIP2Q9BUT9 160 aaKnown RBP7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 TMEM231Q9H6L2 316 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 SLC45A2Q9UMX9 530 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 WDR83OSQ9Y284 106 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 UFC1Q9Y3C8 167 aa7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 FBN1P35555 2871 aaKnown RBP7.54□□□□□ -1.2
SMARCD1-206ENST00000549274 IGHV3-21A0A0B4J1V1 117 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 ANKRD34BA5PLL1 514 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 RNF222A6NCQ9 220 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 CD5P06127 495 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 CTSGP08311 255 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 RD3LP0DJH9 198 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 FGF7P21781 194 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 CLINT1Q14677 625 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 EIF5AL1Q6IS14 154 aaKnown RBP7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 TREML4Q6UXN2 200 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 Q6ZRG5 221 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 CYP2G1PQ6ZSU1 146 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 GNPNAT1Q96EK6 184 aaPredicted RBP7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 OR5B12Q96R08 314 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 ELOVL1Q9BW60 279 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 ARL6Q9H0F7 186 aa7.53□□□□□ -1.2
SMARCD1-206ENST00000549274 FBXL17Q9UF56 701 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms