RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SMPXQ9UHP9 88 aa8.94□□□□□ -0.98
DDX54-206ENST00000549271 APLNQ9ULZ1 77 aa8.94□□□□□ -0.98
DDX54-206ENST00000549271 IGHV7-4-1A0A0J9YVY3 117 aa8.93□□□□□ -0.98
DDX54-206ENST00000549271 CHEK1O14757 476 aa8.93□□□□□ -0.98
DDX54-206ENST00000549271 FAUP35544 74 aaKnown RBP8.93□□□□□ -0.98
DDX54-206ENST00000549271 NPBWR1P48145 328 aa8.93□□□□□ -0.98
DDX54-206ENST00000549271 AP3S2P59780 193 aa8.93□□□□□ -0.98
DDX54-206ENST00000549271 NMSQ5H8A3 153 aa8.93□□□□□ -0.98
DDX54-206ENST00000549271 TOMM20LQ6UXN7 152 aa8.93□□□□□ -0.98
DDX54-206ENST00000549271 C2CD4CQ8TF44 421 aa8.93□□□□□ -0.98
DDX54-206ENST00000549271 TMEM170AQ8WVE7 144 aa8.93□□□□□ -0.98
DDX54-206ENST00000549271 SRRQ9GZT4 340 aa8.93□□□□□ -0.98
DDX54-206ENST00000549271 A0A0B4J2A0 478 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 CORTO00230 105 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 YIF1AO95070 293 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 SULT1A3P0DMM9 295 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 SULT1A4P0DMN0 295 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 HTR2BP41595 481 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 NANOS2P60321 138 aaKnown RBP8.92□□□□□ -0.98
DDX54-206ENST00000549271 RBMS2Q15434 407 aaKnown RBP8.92□□□□□ -0.98
DDX54-206ENST00000549271 BAK1Q16611 211 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 C2orf83Q53S99 150 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 ZNF575Q86XF7 245 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 TMEM116Q8NCL8 245 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 OR4X1Q8NH49 305 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 DEDD2Q8WXF8 326 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 RNF2Q99496 336 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 SDHCQ99643 169 aaPredicted RBP8.92□□□□□ -0.98
DDX54-206ENST00000549271 RHPN1-AS1Q9BWJ2 59 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 MFFQ9GZY8 342 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 HEYLQ9NQ87 328 aaPredicted RBP8.92□□□□□ -0.98
DDX54-206ENST00000549271 SHPKQ9UHJ6 478 aa8.92□□□□□ -0.98
DDX54-206ENST00000549271 IGHV3OR16-13A0A075B7E8 117 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 IGHV3-49A0A0A0MS15 119 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 TRAV14DV4A0A0A6YYC5 116 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 IGHV3-74A0A0B4J1X5 117 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 A0A1B0GU03 582 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 CLN5O75503 358 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 NXPH3O95157 252 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 APOHP02749 345 aaPredicted RBP8.91□□□□□ -0.98
DDX54-206ENST00000549271 IFNA4P05014 189 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 CCR6P51684 374 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 TMEM128Q5BJH2 165 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 SPANXN2Q5MJ10 180 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 FAM90A2PQ658T7 463 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 ZNF600Q6ZNG1 722 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 LGI3Q8N145 548 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 LILRB2Q8N423 598 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 SLC25A21Q9BQT8 299 aaPredicted RBP8.91□□□□□ -0.98
DDX54-206ENST00000549271 CSTL1Q9H114 145 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 ZFAND3Q9H8U3 227 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 HSPB7Q9UBY9 170 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 FBXL17Q9UF56 701 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 PUS1Q9Y606 427 aaKnown RBP eCLIP8.91□□□□□ -0.98
DDX54-206ENST00000549271 LRP1BQ9NZR2 4599 aa8.91□□□□□ -0.98
DDX54-206ENST00000549271 CEBPZOSA8MTT3 80 aa8.9□□□□□ -0.98
DDX54-206ENST00000549271 MPTX1A8MV57 137 aa8.9□□□□□ -0.98
DDX54-206ENST00000549271 PITX3O75364 302 aa8.9□□□□□ -0.98
DDX54-206ENST00000549271 IGKV1-17P01599 117 aa8.9□□□□□ -0.98
DDX54-206ENST00000549271 CD5P06127 495 aa8.9□□□□□ -0.98
DDX54-206ENST00000549271 RPL35AP18077 110 aaKnown RBP8.9□□□□□ -0.98
DDX54-206ENST00000549271 OPRK1P41145 380 aa8.9□□□□□ -0.98
DDX54-206ENST00000549271 SMCO1Q147U7 214 aa8.9□□□□□ -0.98
DDX54-206ENST00000549271 PRSS54Q6PEW0 395 aa8.9□□□□□ -0.98
DDX54-206ENST00000549271 TMED4Q7Z7H5 227 aa8.9□□□□□ -0.98
DDX54-206ENST00000549271 LRTM2Q8N967 370 aa8.9□□□□□ -0.98
DDX54-206ENST00000549271 C11orf45Q8TAV5 145 aa8.9□□□□□ -0.98
DDX54-206ENST00000549271 C11orf68Q9H3H3 251 aaKnown RBP8.9□□□□□ -0.98
DDX54-206ENST00000549271 VSIRQ9H7M9 311 aa8.9□□□□□ -0.98
DDX54-206ENST00000549271 APOBP04114 4563 aaKnown RBP8.89□□□□□ -0.99
DDX54-206ENST00000549271 ANXA3P12429 323 aa8.89□□□□□ -0.99
DDX54-206ENST00000549271 SRPXP78539 464 aa8.89□□□□□ -0.99
DDX54-206ENST00000549271 TIGITQ495A1 244 aa8.89□□□□□ -0.99
DDX54-206ENST00000549271 APRG1Q8IVJ8 170 aa8.89□□□□□ -0.99
DDX54-206ENST00000549271 SLC24A4Q8NFF2 622 aa8.89□□□□□ -0.99
DDX54-206ENST00000549271 RNASEH2CQ8TDP1 164 aaKnown RBP8.89□□□□□ -0.99
DDX54-206ENST00000549271 ST8SIA2Q92186 375 aa8.89□□□□□ -0.99
DDX54-206ENST00000549271 RBKSQ9H477 322 aa8.89□□□□□ -0.99
DDX54-206ENST00000549271 CACFD1Q9UGQ2 172 aa8.89□□□□□ -0.99
DDX54-206ENST00000549271 DUXBA0A1W2PPF3 345 aa8.88□□□□□ -0.99
DDX54-206ENST00000549271 IGLL5B9A064 214 aa8.88□□□□□ -0.99
DDX54-206ENST00000549271 SFT2D2O95562 160 aa8.88□□□□□ -0.99
DDX54-206ENST00000549271 IGLC1P0CG04 106 aa8.88□□□□□ -0.99
DDX54-206ENST00000549271 NPY1RP25929 384 aa8.88□□□□□ -0.99
DDX54-206ENST00000549271 PPP1R1AQ13522 171 aa8.88□□□□□ -0.99
DDX54-206ENST00000549271 MAPKAPK5-AS1Q8N8E1 139 aa8.88□□□□□ -0.99
DDX54-206ENST00000549271 RARRES2Q99969 163 aa8.88□□□□□ -0.99
DDX54-206ENST00000549271 GINS3Q9BRX5 216 aa8.88□□□□□ -0.99
DDX54-206ENST00000549271 U3KQ87 197 aa8.88□□□□□ -0.99
DDX54-206ENST00000549271 DMBT1Q9UGM3 2413 aaPredicted RBP8.88□□□□□ -0.99
DDX54-206ENST00000549271 TRAV30A0A087WSZ9 112 aa8.87□□□□□ -0.99
DDX54-206ENST00000549271 TRAV2A0A0B4J234 112 aa8.87□□□□□ -0.99
DDX54-206ENST00000549271 IGHV3-66A0A0C4DH42 116 aa8.87□□□□□ -0.99
DDX54-206ENST00000549271 RPS10-NUDT3A0A1W2PQS6 291 aa8.87□□□□□ -0.99
DDX54-206ENST00000549271 CDK2AP2O75956 126 aa8.87□□□□□ -0.99
DDX54-206ENST00000549271 DFFBO76075 338 aa8.87□□□□□ -0.99
DDX54-206ENST00000549271 SLC25A4P12235 298 aa8.87□□□□□ -0.99
DDX54-206ENST00000549271 SLC25A6P12236 298 aa8.87□□□□□ -0.99
DDX54-206ENST00000549271 VAMP1P23763 118 aa8.87□□□□□ -0.99
DDX54-206ENST00000549271 CRYBB3P26998 211 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms