RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 IL22RA2Q969J5 263 aa11.65□□□□□ -0.54
RAPGEF3-217ENST00000548434 TRAV30A0A087WSZ9 112 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 ZNF705EA8MWA4 302 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 DISC1C4P0D8 188 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 RGS5O15539 181 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 RBMY1A1P0DJD3 496 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 RBMY1CP0DJD4 496 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 TMBIM6P55061 237 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 NANOS2P60321 138 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 RBMY1FQ15415 496 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 USF2Q15853 346 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 TMEM268Q5VZI3 342 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 TMEM217Q8N7C4 229 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 DIRAS2Q96HU8 199 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 METTL26Q96S19 204 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 BCL7BQ9BQE9 202 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 PDCD10Q9BUL8 212 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 PRR13Q9NZ81 148 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 RABL2AQ9UBK7 228 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 RABL2BQ9UNT1 228 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 C14orf166Q9Y224 244 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 FAT2Q9NYQ8 4349 aa11.64□□□□□ -0.55
RAPGEF3-217ENST00000548434 DNAH2Q9P225 4427 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 HERC2O95714 4834 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 A0A1W2PS18 150 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 DNASE2O00115 360 aaPredicted RBP11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 CA1P00915 261 aaPredicted RBP11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 SLC25A4P12235 298 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 C4BPBP20851 252 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 TNFSF8P32971 234 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 RND2P52198 227 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 LGALS9CQ6DKI2 356 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 CLVS1Q8IUQ0 354 aaPredicted RBP11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 RPP25LQ8N5L8 163 aaKnown RBP11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 OR1S2Q8NGQ3 325 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 RAB2BQ8WUD1 216 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 TMEM231Q9H6L2 316 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 HSPB7Q9UBY9 170 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 KLK5Q9Y337 293 aaPredicted RBP11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 X6R8D5 127 aa11.63□□□□□ -0.55
RAPGEF3-217ENST00000548434 PITX3O75364 302 aa11.62□□□□□ -0.55
RAPGEF3-217ENST00000548434 OR10J1P30954 320 aa11.62□□□□□ -0.55
RAPGEF3-217ENST00000548434 LYZL2Q7Z4W2 148 aa11.62□□□□□ -0.55
RAPGEF3-217ENST00000548434 SLC24A4Q8NFF2 622 aa11.62□□□□□ -0.55
RAPGEF3-217ENST00000548434 PRRT1Q99946 306 aa11.62□□□□□ -0.55
RAPGEF3-217ENST00000548434 ENY2Q9NPA8 101 aa11.62□□□□□ -0.55
RAPGEF3-217ENST00000548434 HEYLQ9NQ87 328 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF3-217ENST00000548434 IGKV1D-37A0A075B6S9 117 aa11.61□□□□□ -0.55
RAPGEF3-217ENST00000548434 RPS10-NUDT3A0A1W2PQS6 291 aa11.61□□□□□ -0.55
RAPGEF3-217ENST00000548434 KNCNA6PVL3 124 aa11.61□□□□□ -0.55
RAPGEF3-217ENST00000548434 DEFB4AO15263 64 aa11.61□□□□□ -0.55
RAPGEF3-217ENST00000548434 BUB3O43684 328 aa11.61□□□□□ -0.55
RAPGEF3-217ENST00000548434 ZNF688P0C7X2 276 aa11.61□□□□□ -0.55
RAPGEF3-217ENST00000548434 IL18Q14116 193 aa11.61□□□□□ -0.55
RAPGEF3-217ENST00000548434 STXBP6Q8NFX7 210 aa11.61□□□□□ -0.55
RAPGEF3-217ENST00000548434 C11orf45Q8TAV5 145 aa11.61□□□□□ -0.55
RAPGEF3-217ENST00000548434 NPIPB3Q92617 1050 aa11.61□□□□□ -0.55
RAPGEF3-217ENST00000548434 RAB40CQ96S21 281 aa11.61□□□□□ -0.55
RAPGEF3-217ENST00000548434 RABAC1Q9UI14 185 aa11.61□□□□□ -0.55
RAPGEF3-217ENST00000548434 A0A0B4J2A0 478 aa11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 H3BMQ9 156 aa11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 SULT1A3P0DMM9 295 aa11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 SULT1A4P0DMN0 295 aa11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 RPL11P62913 178 aaKnown RBP11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 PRR20EP86478 221 aa11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 PRR20CP86479 221 aa11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 PRR20DP86480 221 aa11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 PRR20BP86481 221 aa11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 PRR20AP86496 221 aa11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 KLF9Q13886 244 aaPredicted RBP11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 TRIM63Q969Q1 353 aa11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 HRH4Q9H3N8 390 aa11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 SEPSECSQ9HD40 501 aaKnown RBP11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 SHPKQ9UHJ6 478 aa11.6□□□□□ -0.55
RAPGEF3-217ENST00000548434 ELOA3CA0A087WX78 387 aaPredicted RBP11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 DEDDO75618 318 aa11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 TOMM40O96008 361 aa11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 HNRNPCP07910 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 SPP1P10451 314 aa11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 PSG1P11464 419 aa11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 NPY1RP25929 384 aa11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 CCR6P51684 374 aa11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 STHQ8IWL8 128 aa11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 RNASE11Q8TAA1 199 aaKnown RBP11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 Q8WTZ3 238 aa11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 RBKSQ9H477 322 aa11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 RSL24D1Q9UHA3 163 aaKnown RBP11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 APLNQ9ULZ1 77 aa11.59□□□□□ -0.55
RAPGEF3-217ENST00000548434 IGHV4-28A0A0C4DH34 117 aa11.58□□□□□ -0.56
RAPGEF3-217ENST00000548434 CEBPZOSA8MTT3 80 aa11.58□□□□□ -0.56
RAPGEF3-217ENST00000548434 FAM90A26D6RGX4 464 aa11.58□□□□□ -0.56
RAPGEF3-217ENST00000548434 SMCO1Q147U7 214 aa11.58□□□□□ -0.56
RAPGEF3-217ENST00000548434 TMEM41BQ5BJD5 291 aa11.58□□□□□ -0.56
RAPGEF3-217ENST00000548434 MORN3Q6PF18 240 aaPredicted RBP11.58□□□□□ -0.56
RAPGEF3-217ENST00000548434 MFFQ9GZY8 342 aa11.58□□□□□ -0.56
RAPGEF3-217ENST00000548434 CACFD1Q9UGQ2 172 aa11.58□□□□□ -0.56
RAPGEF3-217ENST00000548434 KCNIP3Q9Y2W7 256 aa11.58□□□□□ -0.56
RAPGEF3-217ENST00000548434 U3KQ87 197 aa11.58□□□□□ -0.56
RAPGEF3-217ENST00000548434 GAMTQ14353 236 aa11.57□□□□□ -0.56
RAPGEF3-217ENST00000548434 ETFRF1Q6IPR1 90 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms