RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 KDM4DQ6B0I6 523 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF826PQ6ZT77 177 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 HIST2H3AQ71DI3 136 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 FUNDC1Q8IVP5 155 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 OR6V1Q8N148 313 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 Q8N2B8 174 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 OR1M1Q8NGA1 313 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 OR8J3Q8NGG0 315 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 OR1L1Q8NH94 360 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 OR2AE1Q8NHA4 323 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 OR5K1Q8NHB7 308 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 MUC7Q8TAX7 377 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 DYDC1Q8WWB3 177 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 TAMM41Q96BW9 452 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 MALSU1Q96EH3 234 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 Q96MT0 163 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 ERMAPQ96PL5 475 aaPredicted RBP2.25□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF649Q9BS31 505 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 DCUN1D5Q9BTE7 237 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 CHCHD7Q9BUK0 85 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 NXF2Q9GZY0 626 aaKnown RBP2.25□□□□□ -2.05
PTCH1-216ENST00000548379 GID8Q9NWU2 228 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 USE1Q9NZ43 259 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 ANXA10Q9UJ72 324 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 CBY1Q9Y3M2 126 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 TBL2Q9Y4P3 447 aaKnown RBP2.25□□□□□ -2.05
PTCH1-216ENST00000548379 MPC1Q9Y5U8 109 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 IER3IP1Q9Y5U9 82 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 HEATR5BQ9P2D3 2071 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 ABCA1O95477 2261 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 CR1P17927 2039 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 DNAJC13O75165 2243 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 A0A087WUU8 490 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 OR2AT4A6NND4 320 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 BBIP1A8MTZ0 92 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF878C9JN71 531 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 M0QZK8 103 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 CDC42EP2O14613 210 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 MYL12BO14950 172 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 PSPHP1O15172 72 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 RBBP9O75884 186 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 CELP19835 753 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 RAB13P51153 203 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 DYNLT3P51808 116 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 BLVRAP53004 296 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 SLC18A1P54219 525 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 SMIM11AP58511 58 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 MAGOHP61326 146 aaKnown RBP2.24□□□□□ -2.05
PTCH1-216ENST00000548379 IFITM3Q01628 133 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 SMIM21Q3B7S5 101 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 YIF1BQ5BJH7 314 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 TTC32Q5I0X7 151 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 TMEM236Q5W0B7 351 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 RPL13AP3Q6NVV1 102 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 SMARCD3Q6STE5 483 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 IGFL1Q6UW32 110 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 NEGR1Q7Z3B1 354 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 DCXRQ7Z4W1 244 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 ARPINQ7Z6K5 226 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 NAA40Q86UY6 237 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF561Q8N587 486 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF645Q8N7E2 425 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 SLC35G3Q8N808 338 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 LFNGQ8NES3 379 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 SLC26A10Q8NG04 563 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 OR5T1Q8NG75 326 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 OR52L1Q8NGH7 329 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 OR2T4Q8NH00 348 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 OR2T27Q8NH04 317 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 OR4K13Q8NH42 304 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 OR1S1Q8NH92 325 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 ENKURQ8TC29 256 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 DYNC2LI1Q8TCX1 351 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 GHSRQ92847 366 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 SLAMF6Q96DU3 332 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 REEP6Q96HR9 211 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 LINC00477Q96M19 166 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 GAFA1Q96PS6 74 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 GPX7Q96SL4 187 aaPredicted RBP2.24□□□□□ -2.05
PTCH1-216ENST00000548379 NMNAT3Q96T66 252 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 C12orf4Q9NQ89 552 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 RASL12Q9NYN1 266 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 ENOPH1Q9UHY7 261 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 GLS2Q9UI32 602 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 SIGLEC7Q9Y286 467 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 LHFPL6Q9Y693 200 aa2.24□□□□□ -2.05
PTCH1-216ENST00000548379 RTTNQ86VV8 2226 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 EML6Q6ZMW3 1958 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 IGLV2-18A0A075B6J9 118 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 TRAV8-6A0A0B4J262 113 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 LCE6AA0A183 80 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 hADV38S2A0JD32 116 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 MRASO14807 208 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 TCAPO15273 167 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 FABP7O15540 132 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 MPZL2O60487 215 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 SERPINA1P01009 418 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 IFNGP01579 166 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 RBP4P02753 201 aa2.23□□□□□ -2.05
PTCH1-216ENST00000548379 ORM1P02763 201 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms