RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 PRRT1Q99946 306 aa9.08□□□□□ -0.96
GCN1-204ENST00000548132 C6orf62Q9GZU0 229 aaPredicted RBP9.08□□□□□ -0.96
GCN1-204ENST00000548132 DNAH17Q9UFH2 4485 aa9.08□□□□□ -0.96
GCN1-204ENST00000548132 MPTX1A8MV57 137 aa9.07□□□□□ -0.96
GCN1-204ENST00000548132 CA1P00915 261 aaPredicted RBP9.07□□□□□ -0.96
GCN1-204ENST00000548132 TNFSF8P32971 234 aa9.07□□□□□ -0.96
GCN1-204ENST00000548132 HTR2BP41595 481 aa9.07□□□□□ -0.96
GCN1-204ENST00000548132 DHODHQ02127 395 aa9.07□□□□□ -0.96
GCN1-204ENST00000548132 CEMP1Q6PRD7 247 aaPredicted RBP9.07□□□□□ -0.96
GCN1-204ENST00000548132 Q8NAQ8 132 aa9.07□□□□□ -0.96
GCN1-204ENST00000548132 GATAD1Q8WUU5 269 aa9.07□□□□□ -0.96
GCN1-204ENST00000548132 IL22RA2Q969J5 263 aa9.07□□□□□ -0.96
GCN1-204ENST00000548132 RBM38Q9H0Z9 239 aaKnown RBP9.07□□□□□ -0.96
GCN1-204ENST00000548132 CSTL1Q9H114 145 aa9.07□□□□□ -0.96
GCN1-204ENST00000548132 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.07□□□□□ -0.96
GCN1-204ENST00000548132 HSPB7Q9UBY9 170 aa9.07□□□□□ -0.96
GCN1-204ENST00000548132 NPY1RP25929 384 aa9.06□□□□□ -0.96
GCN1-204ENST00000548132 SUB1P53999 127 aaKnown RBP eCLIP9.06□□□□□ -0.96
GCN1-204ENST00000548132 LYZL2Q7Z4W2 148 aa9.06□□□□□ -0.96
GCN1-204ENST00000548132 STXBP6Q8NFX7 210 aa9.06□□□□□ -0.96
GCN1-204ENST00000548132 OR1S2Q8NGQ3 325 aa9.06□□□□□ -0.96
GCN1-204ENST00000548132 RNASEH2CQ8TDP1 164 aaKnown RBP9.06□□□□□ -0.96
GCN1-204ENST00000548132 GRAMD2BQ96HH9 432 aa9.06□□□□□ -0.96
GCN1-204ENST00000548132 METTL26Q96S19 204 aa9.06□□□□□ -0.96
GCN1-204ENST00000548132 ENY2Q9NPA8 101 aa9.06□□□□□ -0.96
GCN1-204ENST00000548132 HEYLQ9NQ87 328 aaPredicted RBP9.06□□□□□ -0.96
GCN1-204ENST00000548132 IGKV1D-37A0A075B6S9 117 aa9.05□□□□□ -0.96
GCN1-204ENST00000548132 A0A0B4J2A0 478 aa9.05□□□□□ -0.96
GCN1-204ENST00000548132 CD5P06127 495 aa9.05□□□□□ -0.96
GCN1-204ENST00000548132 ZNF688P0C7X2 276 aa9.05□□□□□ -0.96
GCN1-204ENST00000548132 SULT1A3P0DMM9 295 aa9.05□□□□□ -0.96
GCN1-204ENST00000548132 SULT1A4P0DMN0 295 aa9.05□□□□□ -0.96
GCN1-204ENST00000548132 OR10J1P30954 320 aa9.05□□□□□ -0.96
GCN1-204ENST00000548132 NANOS2P60321 138 aaKnown RBP9.05□□□□□ -0.96
GCN1-204ENST00000548132 YPEL3P61236 119 aaPredicted RBP9.05□□□□□ -0.96
GCN1-204ENST00000548132 C16orf54Q6UWD8 224 aa9.05□□□□□ -0.96
GCN1-204ENST00000548132 RABL2AQ9UBK7 228 aaPredicted RBP9.05□□□□□ -0.96
GCN1-204ENST00000548132 SHPKQ9UHJ6 478 aa9.05□□□□□ -0.96
GCN1-204ENST00000548132 RABAC1Q9UI14 185 aa9.05□□□□□ -0.96
GCN1-204ENST00000548132 RABL2BQ9UNT1 228 aa9.05□□□□□ -0.96
GCN1-204ENST00000548132 HERC2O95714 4834 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 KNCNA6PVL3 124 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 CEBPZOSA8MTT3 80 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 DEFB4AO15263 64 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 PITX3O75364 302 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 SLC25A4P12235 298 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 NPPCP23582 126 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 OR11H2Q8NH07 326 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 MCFD2Q8NI22 146 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 PHLDA1Q8WV24 401 aaPredicted RBP9.04□□□□□ -0.96
GCN1-204ENST00000548132 RARRES2Q99969 163 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 RBKSQ9H477 322 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 TMEM231Q9H6L2 316 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 RSL24D1Q9UHA3 163 aaKnown RBP9.04□□□□□ -0.96
GCN1-204ENST00000548132 X6R8D5 127 aa9.04□□□□□ -0.96
GCN1-204ENST00000548132 RPS10-NUDT3A0A1W2PQS6 291 aa9.03□□□□□ -0.96
GCN1-204ENST00000548132 PRSS46E5RG02 174 aa9.03□□□□□ -0.96
GCN1-204ENST00000548132 TOMM40O96008 361 aa9.03□□□□□ -0.96
GCN1-204ENST00000548132 IL4P05112 153 aa9.03□□□□□ -0.96
GCN1-204ENST00000548132 HNRNPCP07910 306 aaKnown RBP eCLIP9.03□□□□□ -0.96
GCN1-204ENST00000548132 RBMY1A1P0DJD3 496 aaKnown RBP9.03□□□□□ -0.96
GCN1-204ENST00000548132 RBMY1CP0DJD4 496 aa9.03□□□□□ -0.96
GCN1-204ENST00000548132 SMCO1Q147U7 214 aa9.03□□□□□ -0.96
GCN1-204ENST00000548132 RBMY1FQ15415 496 aaKnown RBP9.03□□□□□ -0.96
GCN1-204ENST00000548132 RPP25LQ8N5L8 163 aaKnown RBP9.03□□□□□ -0.96
GCN1-204ENST00000548132 CSNK1G2-AS1Q8NCQ2 148 aa9.03□□□□□ -0.96
GCN1-204ENST00000548132 DTD1Q8TEA8 209 aa9.03□□□□□ -0.96
GCN1-204ENST00000548132 NPIPB3Q92617 1050 aa9.03□□□□□ -0.96
GCN1-204ENST00000548132 ACY3Q96HD9 319 aa9.03□□□□□ -0.96
GCN1-204ENST00000548132 MCUBQ9NWR8 336 aa9.03□□□□□ -0.96
GCN1-204ENST00000548132 PKHD1P08F94 4074 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 IGKV1OR2-108A0A075B7D4 117 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 TRAV30A0A087WSZ9 112 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 IGHV4-28A0A0C4DH34 117 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 ZNF705EA8MWA4 302 aaPredicted RBP9.02□□□□□ -0.97
GCN1-204ENST00000548132 FAM90A26D6RGX4 464 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 DNASE2O00115 360 aaPredicted RBP9.02□□□□□ -0.97
GCN1-204ENST00000548132 DEDDO75618 318 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 LY6G6CO95867 125 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 PSG1P11464 419 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 AKR1C4P17516 323 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 CCR6P51684 374 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 CMC4P56277 68 aaPredicted RBP9.02□□□□□ -0.97
GCN1-204ENST00000548132 PAFAH1B2P68402 229 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 GSG1LQ6UXU4 331 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 CCDC190Q86UF4 302 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 SCP2D1Q9UJQ7 156 aa9.02□□□□□ -0.97
GCN1-204ENST00000548132 A0A1W2PS18 150 aa9.01□□□□□ -0.97
GCN1-204ENST00000548132 FABP12A6NFH5 140 aa9.01□□□□□ -0.97
GCN1-204ENST00000548132 SOCS3O14543 225 aa9.01□□□□□ -0.97
GCN1-204ENST00000548132 BUB3O43684 328 aa9.01□□□□□ -0.97
GCN1-204ENST00000548132 DEFB1P60022 68 aa9.01□□□□□ -0.97
GCN1-204ENST00000548132 RPL11P62913 178 aaKnown RBP9.01□□□□□ -0.97
GCN1-204ENST00000548132 PRR20EP86478 221 aa9.01□□□□□ -0.97
GCN1-204ENST00000548132 PRR20CP86479 221 aa9.01□□□□□ -0.97
GCN1-204ENST00000548132 PRR20DP86480 221 aa9.01□□□□□ -0.97
GCN1-204ENST00000548132 PRR20BP86481 221 aa9.01□□□□□ -0.97
GCN1-204ENST00000548132 PRR20AP86496 221 aa9.01□□□□□ -0.97
GCN1-204ENST00000548132 LGI3Q8N145 548 aa9.01□□□□□ -0.97
GCN1-204ENST00000548132 TMEM217Q8N7C4 229 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms