RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 TMPRSS5Q9H3S3 457 aa10.59□□□□□ -0.71
PTPRB-205ENST00000547715 PLA2G2EQ9NZK7 142 aa10.59□□□□□ -0.71
PTPRB-205ENST00000547715 IGHV4-4A0A075B6R2 117 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 FXYD6-FXYD2A0A087WZ82 144 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 OR2T8A6NH00 312 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 FAM74A7A6NL05 159 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 M0R2N4 97 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 NUPL2O15504 423 aaKnown RBP10.58□□□□□ -0.72
PTPRB-205ENST00000547715 ZNF207O43670 478 aaKnown RBP10.58□□□□□ -0.72
PTPRB-205ENST00000547715 CA1P00915 261 aaPredicted RBP10.58□□□□□ -0.72
PTPRB-205ENST00000547715 MT-ND4LP03901 98 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 HLA-GP17693 338 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 TFPI2P48307 235 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 RAB5CP51148 216 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 RPL8P62917 257 aaKnown RBP10.58□□□□□ -0.72
PTPRB-205ENST00000547715 RAB11BQ15907 218 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 FAM74A3Q4VXF1 159 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 ACOT7LQ6ZUV0 252 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 NR2C2APQ86WQ0 139 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 OR4S2Q8NH73 311 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 GFI1Q99684 422 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 FXYD6Q9H0Q3 95 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 THYN1Q9P016 225 aa10.58□□□□□ -0.72
PTPRB-205ENST00000547715 AK6Q9Y3D8 172 aaKnown RBP10.58□□□□□ -0.72
PTPRB-205ENST00000547715 C5orf52A6NGY3 159 aa10.57□□□□□ -0.72
PTPRB-205ENST00000547715 CGB1A6NKQ9 187 aa10.57□□□□□ -0.72
PTPRB-205ENST00000547715 CYCSP99999 105 aaKnown RBP10.57□□□□□ -0.72
PTPRB-205ENST00000547715 TMEM187Q14656 261 aa10.57□□□□□ -0.72
PTPRB-205ENST00000547715 C2orf76Q3KRA6 126 aa10.57□□□□□ -0.72
PTPRB-205ENST00000547715 ZNF546Q86UE3 836 aa10.57□□□□□ -0.72
PTPRB-205ENST00000547715 RNF141Q8WVD5 230 aa10.57□□□□□ -0.72
PTPRB-205ENST00000547715 FAM3DQ96BQ1 224 aa10.57□□□□□ -0.72
PTPRB-205ENST00000547715 HRH4Q9H3N8 390 aa10.57□□□□□ -0.72
PTPRB-205ENST00000547715 IGKV3-7A0A075B6H7 116 aa10.56□□□□□ -0.72
PTPRB-205ENST00000547715 IGKV1D-8A0A087WSZ0 117 aa10.56□□□□□ -0.72
PTPRB-205ENST00000547715 LINC00587B1AMM8 73 aa10.56□□□□□ -0.72
PTPRB-205ENST00000547715 EIF3GO75821 320 aaKnown RBP eCLIP10.56□□□□□ -0.72
PTPRB-205ENST00000547715 GNB3P16520 340 aa10.56□□□□□ -0.72
PTPRB-205ENST00000547715 HLA-DMBP28068 263 aa10.56□□□□□ -0.72
PTPRB-205ENST00000547715 CMC4P56277 68 aaPredicted RBP10.56□□□□□ -0.72
PTPRB-205ENST00000547715 PLA2G7Q13093 441 aa10.56□□□□□ -0.72
PTPRB-205ENST00000547715 ATRAIDQ6UW56 229 aa10.56□□□□□ -0.72
PTPRB-205ENST00000547715 Q6ZTC4 211 aa10.56□□□□□ -0.72
PTPRB-205ENST00000547715 ZNF575Q86XF7 245 aa10.56□□□□□ -0.72
PTPRB-205ENST00000547715 HSPG2P98160 4391 aa10.56□□□□□ -0.72
PTPRB-205ENST00000547715 TRAV10A0A0B4J240 114 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 DBX1A6NMT0 343 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 NDUFA4O00483 81 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 HRASP01112 189 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 IGLV2-14P01704 120 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 TPT1P13693 172 aaKnown RBP10.55□□□□□ -0.72
PTPRB-205ENST00000547715 RAB2AP61019 212 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 BLOC1S1P78537 153 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 PVRIGQ6DKI7 326 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 LILRB2Q8N423 598 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 POM121L12Q8N7R1 296 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 Q8NAQ8 132 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 INO80EQ8NBZ0 244 aaPredicted RBP10.55□□□□□ -0.72
PTPRB-205ENST00000547715 VN1R17PQ8TDU5 208 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 BSCL2Q96G97 398 aaPredicted RBP10.55□□□□□ -0.72
PTPRB-205ENST00000547715 RNF2Q99496 336 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 HSD17B10Q99714 261 aaKnown RBP10.55□□□□□ -0.72
PTPRB-205ENST00000547715 NIT2Q9NQR4 276 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 OR2W1Q9Y3N9 320 aa10.55□□□□□ -0.72
PTPRB-205ENST00000547715 TMEM272A0A1B0GTI8 110 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 IGLC7A0M8Q6 106 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 K7EMT4 169 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 FCER2P06734 321 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 AKAIN1P0CW23 69 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 SPP1P10451 314 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 BTF3P20290 206 aaKnown RBP10.54□□□□□ -0.72
PTPRB-205ENST00000547715 BRWD1-AS2P59051 145 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 OR2B8PP59922 312 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 RELQ04864 619 aaPredicted RBP10.54□□□□□ -0.72
PTPRB-205ENST00000547715 TMEM69Q5SWH9 247 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 SPSB3Q6PJ21 355 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 OR10R2Q8NGX6 335 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 PCNPQ8WW12 178 aaKnown RBP10.54□□□□□ -0.72
PTPRB-205ENST00000547715 CHRDL1Q9BU40 450 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 MTFP1Q9UDX5 166 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 SMPXQ9UHP9 88 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 RAB22AQ9UL26 194 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 TNFSF18Q9UNG2 199 aa10.54□□□□□ -0.72
PTPRB-205ENST00000547715 A0A0A6YYH2 397 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 IGHV4-28A0A0C4DH34 117 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 SMIM30A4D0T7 59 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 A6NJ64 397 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 IFITM5A6NNB3 132 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 C15orf62A8K5M9 175 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 MFNGO00587 321 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 CYB5BO43169 146 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 RBMY1A1P0DJD3 496 aaKnown RBP10.53□□□□□ -0.72
PTPRB-205ENST00000547715 RBMY1CP0DJD4 496 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 P0DMU3 169 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 FAM231AP0DMU4 169 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 FAM231CP0DMU5 169 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 HIST1H1DP16402 221 aaKnown RBP10.53□□□□□ -0.72
PTPRB-205ENST00000547715 RAB4AP20338 218 aa10.53□□□□□ -0.72
PTPRB-205ENST00000547715 RBMY1FQ15415 496 aaKnown RBP10.53□□□□□ -0.72
PTPRB-205ENST00000547715 Q6ZS49 121 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms