RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 DLK1P80370 383 aa17.71■□□□□ 0.43
SMARCD1-203ENST00000547247 FGL1Q08830 312 aa17.71■□□□□ 0.43
SMARCD1-203ENST00000547247 ARL16Q0P5N6 197 aa17.71■□□□□ 0.43
SMARCD1-203ENST00000547247 HAPLN4Q86UW8 402 aa17.71■□□□□ 0.43
SMARCD1-203ENST00000547247 OR9G4Q8NGQ1 327 aa17.71■□□□□ 0.43
SMARCD1-203ENST00000547247 OR1S2Q8NGQ3 325 aa17.71■□□□□ 0.43
SMARCD1-203ENST00000547247 SLC25A31Q9H0C2 315 aa17.71■□□□□ 0.43
SMARCD1-203ENST00000547247 ZNF320A2RRD8 509 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 LGALS9O00182 355 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 NDUFA4O00483 81 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 IGKV1-17P01599 117 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 REC114Q7Z4M0 266 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 CHAC2Q8WUX2 184 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 GGACTQ9BVM4 153 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 PEMTQ9UBM1 199 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 TRAV14DV4A0A0A6YYC5 116 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 AKR1C1Q04828 323 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 TIGITQ495A1 244 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 ZNF600Q6ZNG1 722 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 TMEM217Q8N7C4 229 aa17.7■□□□□ 0.42
SMARCD1-203ENST00000547247 SMCO3A2RU48 225 aa17.69■□□□□ 0.42
SMARCD1-203ENST00000547247 ZFP92A6NM28 416 aa17.69■□□□□ 0.42
SMARCD1-203ENST00000547247 FNDC10F2Z333 226 aa17.69■□□□□ 0.42
SMARCD1-203ENST00000547247 LYL1P12980 280 aa17.69■□□□□ 0.42
SMARCD1-203ENST00000547247 IGLL1P15814 213 aa17.69■□□□□ 0.42
SMARCD1-203ENST00000547247 SLC38A11Q08AI6 406 aa17.69■□□□□ 0.42
SMARCD1-203ENST00000547247 UNQ9165/PRO28630Q6UXU0 137 aa17.69■□□□□ 0.42
SMARCD1-203ENST00000547247 OR2T35Q8NGX2 323 aa17.69■□□□□ 0.42
SMARCD1-203ENST00000547247 ELOVL1Q9BW60 279 aa17.69■□□□□ 0.42
SMARCD1-203ENST00000547247 FBN3Q75N90 2809 aa17.69■□□□□ 0.42
SMARCD1-203ENST00000547247 CMYA5Q8N3K9 4069 aa17.69■□□□□ 0.42
SMARCD1-203ENST00000547247 NOTCH3Q9UM47 2321 aa17.68■□□□□ 0.42
SMARCD1-203ENST00000547247 SEC14L6B5MCN3 397 aa17.68■□□□□ 0.42
SMARCD1-203ENST00000547247 YIF1AO95070 293 aa17.68■□□□□ 0.42
SMARCD1-203ENST00000547247 S100A11P31949 105 aa17.68■□□□□ 0.42
SMARCD1-203ENST00000547247 HBG1P69891 147 aa17.68■□□□□ 0.42
SMARCD1-203ENST00000547247 HBG2P69892 147 aa17.68■□□□□ 0.42
SMARCD1-203ENST00000547247 TMEM190Q8WZ59 177 aa17.68■□□□□ 0.42
SMARCD1-203ENST00000547247 YPEL3P61236 119 aaPredicted RBP17.67■□□□□ 0.42
SMARCD1-203ENST00000547247 EWSR1Q01844 656 aaKnown RBP eCLIP17.67■□□□□ 0.42
SMARCD1-203ENST00000547247 TMEM144Q7Z5S9 345 aa17.67■□□□□ 0.42
SMARCD1-203ENST00000547247 THAP8Q8NA92 274 aa17.67■□□□□ 0.42
SMARCD1-203ENST00000547247 ZNF414Q96IQ9 312 aa17.67■□□□□ 0.42
SMARCD1-203ENST00000547247 NPVFQ9HCQ7 196 aa17.67■□□□□ 0.42
SMARCD1-203ENST00000547247 NBEAL1Q6ZS30 2694 aa17.67■□□□□ 0.42
SMARCD1-203ENST00000547247 A8MWP6 167 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 NHLH2Q02577 135 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 BAXQ07812 192 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 Q5BKY6 102 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 C9orf66Q5T8R8 295 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 C20orf24Q9BUV8 137 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 UFC1Q9Y3C8 167 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 PUS1Q9Y606 427 aaKnown RBP eCLIP17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 IGKV1D-37A0A075B6S9 117 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 IGKV1OR2-108A0A075B7D4 117 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 ELLP55199 621 aaPredicted RBP17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 LILRB2Q8N423 598 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 Q8WTZ3 238 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 TRGV9Q99603 122 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 GPR61Q9BZJ8 451 aa17.66■□□□□ 0.42
SMARCD1-203ENST00000547247 MGAM2Q2M2H8 2515 aa17.65■□□□□ 0.42
SMARCD1-203ENST00000547247 SAP30O75446 220 aa17.65■□□□□ 0.42
SMARCD1-203ENST00000547247 RPL12P30050 165 aaKnown RBP17.65■□□□□ 0.42
SMARCD1-203ENST00000547247 ATP6V1FQ16864 119 aa17.65■□□□□ 0.42
SMARCD1-203ENST00000547247 TOMM20LQ6UXN7 152 aa17.65■□□□□ 0.42
SMARCD1-203ENST00000547247 IL34Q6ZMJ4 242 aa17.65■□□□□ 0.42
SMARCD1-203ENST00000547247 hCG_2014768A0A024R1R8 64 aa17.64■□□□□ 0.41
SMARCD1-203ENST00000547247 IGHV3OR16-8A0A075B7F1 116 aa17.64■□□□□ 0.41
SMARCD1-203ENST00000547247 FABP1P07148 127 aa17.64■□□□□ 0.41
SMARCD1-203ENST00000547247 RD3LP0DJH9 198 aa17.64■□□□□ 0.41
SMARCD1-203ENST00000547247 INSL3P51460 131 aa17.64■□□□□ 0.41
SMARCD1-203ENST00000547247 TM4SF20Q53R12 229 aa17.64■□□□□ 0.41
SMARCD1-203ENST00000547247 OXLD1Q5BKU9 147 aa17.64■□□□□ 0.41
SMARCD1-203ENST00000547247 DAZ1Q9NQZ3 744 aaKnown RBP17.64■□□□□ 0.41
SMARCD1-203ENST00000547247 UQCC1Q9NVA1 299 aa17.64■□□□□ 0.41
SMARCD1-203ENST00000547247 TMEM213A2RRL7 107 aa17.63■□□□□ 0.41
SMARCD1-203ENST00000547247 C2orf70A6NJV1 201 aa17.63■□□□□ 0.41
SMARCD1-203ENST00000547247 K7EMT4 169 aa17.63■□□□□ 0.41
SMARCD1-203ENST00000547247 TOMM40O96008 361 aa17.63■□□□□ 0.41
SMARCD1-203ENST00000547247 CSN3P07498 182 aa17.63■□□□□ 0.41
SMARCD1-203ENST00000547247 ZNF90Q03938 601 aa17.63■□□□□ 0.41
SMARCD1-203ENST00000547247 OR5C1Q8NGR4 320 aa17.63■□□□□ 0.41
SMARCD1-203ENST00000547247 GINS3Q9BRX5 216 aa17.63■□□□□ 0.41
SMARCD1-203ENST00000547247 TMEM147Q9BVK8 224 aa17.63■□□□□ 0.41
SMARCD1-203ENST00000547247 SIGLEC8Q9NYZ4 499 aa17.63■□□□□ 0.41
SMARCD1-203ENST00000547247 PSG1P11464 419 aa17.62■□□□□ 0.41
SMARCD1-203ENST00000547247 TEPPQ6URK8 271 aa17.62■□□□□ 0.41
SMARCD1-203ENST00000547247 ZFAND3Q9H8U3 227 aa17.62■□□□□ 0.41
SMARCD1-203ENST00000547247 HSPB11Q9Y547 144 aa17.62■□□□□ 0.41
SMARCD1-203ENST00000547247 FOLR2P14207 255 aa17.62■□□□□ 0.41
SMARCD1-203ENST00000547247 NUP62P37198 522 aaPredicted RBP17.62■□□□□ 0.41
SMARCD1-203ENST00000547247 VWC2Q2TAL6 325 aa17.62■□□□□ 0.41
SMARCD1-203ENST00000547247 FXYD6-FXYD2A0A087WZ82 144 aa17.61■□□□□ 0.41
SMARCD1-203ENST00000547247 G3V3Q6 166 aa17.61■□□□□ 0.41
SMARCD1-203ENST00000547247 ZNF207O43670 478 aaKnown RBP17.61■□□□□ 0.41
SMARCD1-203ENST00000547247 CBLN1P23435 193 aa17.61■□□□□ 0.41
SMARCD1-203ENST00000547247 SAMD5Q5TGI4 173 aa17.61■□□□□ 0.41
SMARCD1-203ENST00000547247 OR51G1Q8NGK1 321 aa17.61■□□□□ 0.41
SMARCD1-203ENST00000547247 MARC2Q969Z3 335 aa17.61■□□□□ 0.41
SMARCD1-203ENST00000547247 MRPL27Q9P0M9 148 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms