RNA–Protein interactions for RNA: ENST00000546590.2

TMTC2-202, Transcript of transmembrane and tetratricopeptide repeat containing 2, humanhuman

TSL 1 (best)

Gene TMTC2, Length 4,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC2-202ENST00000546590 IGHV2-5P01817 119 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 IGHG3P01860 377 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 APCSP02743 223 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 FOLR2P14207 255 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 TMEM177Q53S58 311 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 LCN12Q6JVE5 192 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 ZCCHC14Q8WYQ9 949 aaKnown RBP6.89□□□□□ -1.31
TMTC2-202ENST00000546590 EPG5Q9HCE0 2579 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 IFITM10A6NMD0 228 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 ZNF138P52744 262 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 C21orf62-AS1Q17RA5 79 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 MORN5Q5VZ52 161 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 SSX8Q7RTT4 187 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 SFXN3Q9BWM7 321 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 FOXA2Q9Y261 457 aaPredicted RBP6.89□□□□□ -1.31
TMTC2-202ENST00000546590 MTORP42345 2549 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 NACAE9PAV3 2078 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 RELNP78509 3460 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 TCAPO15273 167 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 NUPR1O60356 82 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 P01737 135 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 AMY1AP04745 511 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 HTR1DP28221 377 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 LCN2P80188 198 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 EXOC3-AS1Q8N2X6 119 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 RITA1Q96K30 269 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 RPUSD1Q9UJJ7 312 aaKnown RBP6.89□□□□□ -1.31
TMTC2-202ENST00000546590 E7EUB6 86 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 DLL1O00548 723 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 TM4SF5O14894 197 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 MPDU1O75352 247 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 HYPMO75409 117 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 STAG3L2P0CL84 134 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 STAG3L3P0CL85 134 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 CT45A10P0DMU9 189 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 HINT1P49773 126 aaPredicted RBP6.89□□□□□ -1.31
TMTC2-202ENST00000546590 Q6ZSR3 168 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 Q8NFD4 153 aa6.89□□□□□ -1.31
TMTC2-202ENST00000546590 SEBOXQ9HB31 216 aaPredicted RBP6.89□□□□□ -1.31
TMTC2-202ENST00000546590 HOXB1P14653 301 aaPredicted RBP6.88□□□□□ -1.31
TMTC2-202ENST00000546590 PRRX1P54821 245 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 C1orf162Q8NEQ5 155 aaPredicted RBP6.88□□□□□ -1.31
TMTC2-202ENST00000546590 VSTM2AQ8TAG5 236 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 RNASE6Q93091 150 aaKnown RBP6.88□□□□□ -1.31
TMTC2-202ENST00000546590 DSCAMO60469 2012 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 IL4P05112 153 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 CLEC3BP05452 202 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 PFN1P07737 140 aaKnown RBP6.88□□□□□ -1.31
TMTC2-202ENST00000546590 MBNL2Q5VZF2 373 aaKnown RBP6.88□□□□□ -1.31
TMTC2-202ENST00000546590 SPACA3Q8IXA5 215 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 ZNF664Q8N3J9 261 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 TBL2Q9Y4P3 447 aaKnown RBP6.88□□□□□ -1.31
TMTC2-202ENST00000546590 TRBV20OR9-2A0A075B6H5 130 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 ZNF785A8K8V0 405 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 J3QW42 95 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 CORTO00230 105 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 ISLRO14498 428 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 GPX4P36969 197 aaPredicted RBP6.88□□□□□ -1.31
TMTC2-202ENST00000546590 HNRNPA3P51991 378 aaKnown RBP6.88□□□□□ -1.31
TMTC2-202ENST00000546590 LOXL3P58215 753 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 RNF151Q2KHN1 245 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 EXPH5Q8NEV8 1989 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 SRP14P37108 136 aaKnown RBP6.88□□□□□ -1.31
TMTC2-202ENST00000546590 C11orf42Q8N5U0 333 aa6.88□□□□□ -1.31
TMTC2-202ENST00000546590 RBM14Q96PK6 669 aaKnown RBP6.88□□□□□ -1.31
TMTC2-202ENST00000546590 LRBAP50851 2863 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 TRAV1-1A0A0B4J248 108 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 HSBP1L1C9JCN9 74 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 OR2J3O76001 311 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 LMO1P25800 156 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 PPIFP30405 207 aaKnown RBP6.87□□□□□ -1.31
TMTC2-202ENST00000546590 C11orf1Q9H5F2 150 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 TRBV24-1A0A075B6N3 115 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 NDUFS7O75251 213 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 NBEAP1P0C6P0 100 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 SRSF7Q16629 238 aaKnown RBP eCLIP6.87□□□□□ -1.31
TMTC2-202ENST00000546590 OR8B3Q8NGG8 313 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 SRSF12Q8WXF0 261 aaKnown RBP6.87□□□□□ -1.31
TMTC2-202ENST00000546590 OR8B2Q96RD0 313 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 HIGD1CA8MV81 97 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 TMEM144Q7Z5S9 345 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 OR8A1Q8NGG7 326 aa6.87□□□□□ -1.31
TMTC2-202ENST00000546590 MBD3L4A6NDZ8 208 aaPredicted RBP6.86□□□□□ -1.31
TMTC2-202ENST00000546590 MBD3L3A6NE82 208 aaPredicted RBP6.86□□□□□ -1.31
TMTC2-202ENST00000546590 MBD3L5A6NJ08 208 aaPredicted RBP6.86□□□□□ -1.31
TMTC2-202ENST00000546590 PPOXP50336 477 aa6.86□□□□□ -1.31
TMTC2-202ENST00000546590 CD69Q07108 199 aa6.86□□□□□ -1.31
TMTC2-202ENST00000546590 LY6EQ16553 131 aa6.86□□□□□ -1.31
TMTC2-202ENST00000546590 TDRG1Q3Y452 100 aa6.86□□□□□ -1.31
TMTC2-202ENST00000546590 OR4F17Q8NGA8 305 aa6.86□□□□□ -1.31
TMTC2-202ENST00000546590 MBD3L2Q8NHZ7 208 aaPredicted RBP6.86□□□□□ -1.31
TMTC2-202ENST00000546590 TMEM170AQ8WVE7 144 aa6.86□□□□□ -1.31
TMTC2-202ENST00000546590 FAM168AQ92567 244 aa6.86□□□□□ -1.31
TMTC2-202ENST00000546590 NPIPB11E5RHQ5 1161 aa6.86□□□□□ -1.31
TMTC2-202ENST00000546590 M0R3E3 92 aa6.86□□□□□ -1.31
TMTC2-202ENST00000546590 ORM1P02763 201 aa6.86□□□□□ -1.31
TMTC2-202ENST00000546590 BRS3P32247 399 aa6.86□□□□□ -1.31
TMTC2-202ENST00000546590 PRCDQ00LT1 54 aa6.86□□□□□ -1.31
TMTC2-202ENST00000546590 DMRTC2Q8IXT2 367 aaPredicted RBP6.86□□□□□ -1.31
TMTC2-202ENST00000546590 PRSS3P2Q8NHM4 247 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms