RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 YPEL3P61236 119 aaPredicted RBP8.98□□□□□ -0.97
COPS7A-221ENST00000546229 VBP1P61758 197 aa8.98□□□□□ -0.97
COPS7A-221ENST00000546229 C2orf83Q53S99 150 aa8.98□□□□□ -0.97
COPS7A-221ENST00000546229 RNASE10Q5GAN6 216 aaKnown RBP8.98□□□□□ -0.97
COPS7A-221ENST00000546229 PSMG4Q5JS54 123 aa8.98□□□□□ -0.97
COPS7A-221ENST00000546229 Q6ZR54 194 aa8.98□□□□□ -0.97
COPS7A-221ENST00000546229 OR1S2Q8NGQ3 325 aa8.98□□□□□ -0.97
COPS7A-221ENST00000546229 GLYATL2Q8WU03 294 aa8.98□□□□□ -0.97
COPS7A-221ENST00000546229 TMEM222Q9H0R3 208 aa8.98□□□□□ -0.97
COPS7A-221ENST00000546229 SEPSECSQ9HD40 501 aaKnown RBP8.98□□□□□ -0.97
COPS7A-221ENST00000546229 NACAE9PAV3 2078 aa8.98□□□□□ -0.97
COPS7A-221ENST00000546229 DEFB131BA0A096LNP1 70 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 HELTA6NFD8 242 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 BUB3O43684 328 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 HNRNPCP07910 306 aaKnown RBP eCLIP8.97□□□□□ -0.97
COPS7A-221ENST00000546229 HLA-DRB4P13762 266 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 PGAM2P15259 253 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 RND2P52198 227 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 SUB1P53999 127 aaKnown RBP eCLIP8.97□□□□□ -0.97
COPS7A-221ENST00000546229 SPCS3P61009 180 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 DHODHQ02127 395 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 DHRS2Q13268 280 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 RNASE12Q5GAN4 147 aaKnown RBP8.97□□□□□ -0.97
COPS7A-221ENST00000546229 GDF5OSQ5U4N7 250 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 POM121L12Q8N7R1 296 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 ZNF709Q8N972 641 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 NEU1Q99519 415 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 HLA-DRB4X5D2U9 266 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 MUC4Q99102 2169 aa8.97□□□□□ -0.97
COPS7A-221ENST00000546229 TRAV30A0A087WSZ9 112 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 A0A087WXM4 84 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 SOCS3O14543 225 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 OR5AC1P0C628 307 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 MED14OSP0DP75 135 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 OR10J1P30954 320 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 HTR2BP41595 481 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 DEFB1P60022 68 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 CTF1Q16619 201 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 TRIM16LQ309B1 348 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 FAM219AQ8IW50 185 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 TERB2Q8NHR7 220 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 MARCH1Q8TCQ1 289 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 RNASEH2CQ8TDP1 164 aaKnown RBP8.96□□□□□ -0.98
COPS7A-221ENST00000546229 RTBDNQ9BSG5 229 aaPredicted RBP8.96□□□□□ -0.98
COPS7A-221ENST00000546229 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 NAA50Q9GZZ1 169 aaKnown RBP8.96□□□□□ -0.98
COPS7A-221ENST00000546229 MIXL1Q9H2W2 232 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 NRN1Q9NPD7 142 aa8.96□□□□□ -0.98
COPS7A-221ENST00000546229 SMIM31A0A1B0GVY4 71 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 B3GALNT1O75752 331 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 GABARAPO95166 117 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 TOMM40O96008 361 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 SLC25A4P12235 298 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 LGALS9BQ3B8N2 356 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 NMSQ5H8A3 153 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 FAAP20Q6NZ36 180 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 SELENOHQ8IZQ5 122 aaKnown RBP8.95□□□□□ -0.98
COPS7A-221ENST00000546229 TMEM229BQ8NBD8 167 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 SLC24A4Q8NFF2 622 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 TMEM230Q96A57 120 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 GPR146Q96CH1 333 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 PDCD10Q9BUL8 212 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 XCL2Q9UBD3 114 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 CACNG5Q9UF02 275 aa8.95□□□□□ -0.98
COPS7A-221ENST00000546229 IGKV1D-37A0A075B6S9 117 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 RPS10-NUDT3A0A1W2PQS6 291 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 PRSS29PA6NIE9 313 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 ATG12O94817 140 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 IL4P05112 153 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 P0DMU3 169 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 FAM231AP0DMU4 169 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 FAM231CP0DMU5 169 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 NKX2-1P43699 371 aaPredicted RBP8.94□□□□□ -0.98
COPS7A-221ENST00000546229 SIGLEC15Q6ZMC9 328 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 CCDC71LQ8N9Z2 235 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 RBPMSQ93062 196 aaKnown RBP8.94□□□□□ -0.98
COPS7A-221ENST00000546229 RRNAD1Q96FB5 475 aaKnown RBP8.94□□□□□ -0.98
COPS7A-221ENST00000546229 C17orf77Q96MU5 243 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 CLUHP3Q96NS8 147 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 WDR12Q9GZL7 423 aaKnown RBP8.94□□□□□ -0.98
COPS7A-221ENST00000546229 NAA60Q9H7X0 242 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 COPZ2Q9P299 210 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 TMEM56-RWDD3S4R434 201 aa8.94□□□□□ -0.98
COPS7A-221ENST00000546229 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 TEX13DA0A0J9YY54 714 aaPredicted RBP8.93□□□□□ -0.98
COPS7A-221ENST00000546229 CRYM-AS1A6NIL9 109 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 A8MTW9 85 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 TNFAIP8O95379 198 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 SMIM18P0DKX4 95 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 PSG1P11464 419 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 AP2S1P53680 142 aaPredicted RBP8.93□□□□□ -0.98
COPS7A-221ENST00000546229 MEF2DQ14814 521 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 ZNF79Q15937 498 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 ZFAND1Q8TCF1 268 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 Q8WTZ3 238 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 NPIPB3Q92617 1050 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 NARS2Q96I59 477 aaKnown RBP8.93□□□□□ -0.98
COPS7A-221ENST00000546229 NDUFAF3Q9BU61 184 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 C1QTNF4Q9BXJ3 329 aa8.93□□□□□ -0.98
COPS7A-221ENST00000546229 ENY2Q9NPA8 101 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms