RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 TDRG1Q3Y452 100 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 CENPWQ5EE01 88 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 KLF17Q5JT82 389 aaPredicted RBP8.06□□□□□ -1.12
TRAF1-203ENST00000546084 C1orf194Q5T5A4 169 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 SP5Q6BEB4 398 aaPredicted RBP8.06□□□□□ -1.12
TRAF1-203ENST00000546084 TREML4Q6UXN2 200 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 BORCS7Q96B45 105 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 GCHFRP30047 84 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 MMDQ15546 238 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 COA6Q5JTJ3 125 aaKnown RBP8.06□□□□□ -1.12
TRAF1-203ENST00000546084 LYPD2Q6UXB3 125 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 TMEM106BQ9NUM4 274 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 BET1LQ9NYM9 111 aa8.06□□□□□ -1.12
TRAF1-203ENST00000546084 TNRC6AQ8NDV7 1962 aaKnown RBP8.05□□□□□ -1.12
TRAF1-203ENST00000546084 C15orf62A8K5M9 175 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 CXorf1O96002 111 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 TIMP3P35625 211 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 TPTE2P1Q5T6R2 138 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 MUC15Q8N387 334 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 ZNF714Q96N38 554 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 MCRIP2Q9BUT9 160 aaKnown RBP8.05□□□□□ -1.12
TRAF1-203ENST00000546084 CSTL1Q9H114 145 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 ARL2-SNX15V9GYD0 113 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.05□□□□□ -1.12
TRAF1-203ENST00000546084 SAA1P0DJI8 122 aaPredicted RBP8.05□□□□□ -1.12
TRAF1-203ENST00000546084 TAS2R45P59539 299 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 Q56UQ5 140 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 ST6GALNAC6Q969X2 333 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 FBXL15Q9H469 300 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 EPG5Q9HCE0 2579 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 IGHV3-66A0A0C4DH42 116 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 PGPA6NDG6 321 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 IGHV1-46P01743 117 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 FRMD6-AS1P0C7T7 363 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 RPL8P62917 257 aaKnown RBP8.05□□□□□ -1.12
TRAF1-203ENST00000546084 GAGE1Q13065 139 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 C5orf30Q96GV9 206 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 PMCHL2Q9BQD1 86 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 KCNIP2Q9NS61 270 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 ELOVL5Q9NYP7 299 aa8.05□□□□□ -1.12
TRAF1-203ENST00000546084 TRBV6-6A0A0A6YYG2 114 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 SS18L1O75177 396 aaPredicted RBP8.04□□□□□ -1.12
TRAF1-203ENST00000546084 GLRXP35754 106 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 HLA-DRB5Q30154 266 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 NRN1LQ496H8 165 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 Q6ZN92 141 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 CCL21O00585 134 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 CDKN1AP38936 164 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 RPEL1Q2QD12 228 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 ZBTB34Q8NCN2 500 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 MGST2Q99735 147 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 RAB9BQ9NP90 201 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 SLC45A2Q9UMX9 530 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 HIVEP2P31629 2446 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 COL5A1P20908 1838 aaPredicted RBP8.04□□□□□ -1.12
TRAF1-203ENST00000546084 DIRC3C9JPN6 131 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 USF1P22415 310 aaPredicted RBP8.04□□□□□ -1.12
TRAF1-203ENST00000546084 SRIP30626 198 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 EFNB3Q15768 340 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 MMD2Q8IY49 270 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 NGBQ9NPG2 151 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 ZFP30Q9Y2G7 519 aa8.04□□□□□ -1.12
TRAF1-203ENST00000546084 MRPS18CQ9Y3D5 142 aaKnown RBP8.04□□□□□ -1.12
TRAF1-203ENST00000546084 KBTBD11-OT1A0A1B0GTJ5 212 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 WNT2P09544 360 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 SUB1P53999 127 aaKnown RBP eCLIP8.03□□□□□ -1.12
TRAF1-203ENST00000546084 RBX1P62877 108 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 RBPJQ06330 500 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 PMCHL1Q16048 86 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 VMA21Q3ZAQ7 101 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 C10orf113Q5VZT2 155 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 C11orf53Q8IXP5 236 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 GGTLC1Q9BX51 225 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 UBTD1Q9HAC8 227 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 IDI2-AS1Q9NZ38 188 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 YTHDF2Q9Y5A9 579 aaKnown RBP8.03□□□□□ -1.12
TRAF1-203ENST00000546084 SNAI2O43623 268 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 PAFAH1B2P68402 229 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 JMJD1CQ15652 2540 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 TMEM177Q53S58 311 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 PRNTQ86SH4 94 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 OR1L8Q8NGR8 309 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 DEFB104AQ8WTQ1 72 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 SCNM1Q9BWG6 230 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 WDR83OSQ9Y284 106 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 RELNP78509 3460 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 LOC389332A0A1B0GUA5 103 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 J3QR89 54 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 K7EQM0 130 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 CHEK1O14757 476 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 TYMSP04818 313 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 HINT1P49773 126 aaPredicted RBP8.03□□□□□ -1.12
TRAF1-203ENST00000546084 PDLIM4P50479 330 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 CKS1BP61024 79 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 Q6ZWC4 215 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 PAXXQ9BUH6 204 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 ZNF292O60281 2723 aa8.03□□□□□ -1.12
TRAF1-203ENST00000546084 TRBV20OR9-2A0A075B6H5 130 aa8.02□□□□□ -1.13
TRAF1-203ENST00000546084 TRAV8-1A0A0A6YYK1 113 aa8.02□□□□□ -1.13
TRAF1-203ENST00000546084 SRRM5B3KS81 715 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms