RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 GSX1Q9H4S2 264 aaPredicted RBP7.17□□□□□ -1.26
CLIP1-218ENST00000545889 C12orf77C9JDV5 145 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 H3BTX0 84 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 WISP2O76076 250 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 DANCRP0C864 163 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 TWIST1Q15672 202 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 HLA-DRB5Q30154 266 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 MRPL54Q6P161 138 aaKnown RBP7.17□□□□□ -1.26
CLIP1-218ENST00000545889 WDR73Q6P4I2 378 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 FAM90A1Q86YD7 464 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 CLDND2Q8NHS1 167 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 REPIN1Q9BWE0 567 aaKnown RBP7.17□□□□□ -1.26
CLIP1-218ENST00000545889 FAM206AQ9NX38 181 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 SRSF10O75494 262 aaKnown RBP7.17□□□□□ -1.26
CLIP1-218ENST00000545889 PRB1P04280 392 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 PSG1P11464 419 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 EWSR1Q01844 656 aaKnown RBP eCLIP7.17□□□□□ -1.26
CLIP1-218ENST00000545889 CR1LQ2VPA4 569 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 BSXQ3C1V8 233 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 C5orf24Q7Z6I8 188 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 CST9LQ9H4G1 147 aa7.17□□□□□ -1.26
CLIP1-218ENST00000545889 FOXA2Q9Y261 457 aaPredicted RBP7.17□□□□□ -1.26
CLIP1-218ENST00000545889 A8MWL6 223 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 CD1AP06126 327 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 PNRC1Q12796 327 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-218ENST00000545889 ZNF525Q8N782 197 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 SEPSECSQ9HD40 501 aaKnown RBP7.16□□□□□ -1.26
CLIP1-218ENST00000545889 FOXI3A8MTJ6 420 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-218ENST00000545889 E9PQ18 207 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 DKK1O94907 266 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 AMY1AP04745 511 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 CD99P14209 185 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 ANOS1P23352 680 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 TMEM219Q86XT9 240 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 OR10S1Q8NGN2 331 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 GPHA2Q96T91 129 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 VGLL1Q99990 258 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 LAMA1P25391 3075 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 PGLYRP1O75594 196 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-218ENST00000545889 IGHV1-46P01743 117 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 CCL20P78556 96 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 OR1N2Q8NGR9 330 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 WNT10AQ9GZT5 417 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 MALRD1Q5VYJ5 2156 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 LY6HO94772 140 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 GCSHP23434 173 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 CMC4P56277 68 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-218ENST00000545889 SRSF9Q13242 221 aaKnown RBP eCLIP7.16□□□□□ -1.26
CLIP1-218ENST00000545889 C2orf83Q53S99 150 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 FAM110DQ8TAY7 271 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-218ENST00000545889 MRPL20Q9BYC9 149 aaKnown RBP7.16□□□□□ -1.26
CLIP1-218ENST00000545889 RPRMQ9NS64 109 aa7.16□□□□□ -1.26
CLIP1-218ENST00000545889 ZNF253O75346 499 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 RHOGP84095 191 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 MIC13Q5XKP0 118 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 TMEM167AQ8TBQ9 72 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 WDFY4Q6ZS81 3184 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 GAGE10A6NGK3 116 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 STAG3L3P0CL85 134 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 PLA2G5P39877 138 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 PSMB2P49721 201 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 ATP5IP56385 69 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-218ENST00000545889 RUNX1Q01196 453 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 COX19Q49B96 90 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 TMEM97Q5BJF2 176 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 ZNF502Q8TBZ5 544 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 C1QTNF5Q9BXJ0 243 aa7.15□□□□□ -1.26
CLIP1-218ENST00000545889 H7C1H1 209 aa7.15□□□□□ -1.27
CLIP1-218ENST00000545889 TIMM23O14925 209 aa7.15□□□□□ -1.27
CLIP1-218ENST00000545889 ATP6V0CP27449 155 aa7.15□□□□□ -1.27
CLIP1-218ENST00000545889 STPG4Q8N801 248 aa7.15□□□□□ -1.27
CLIP1-218ENST00000545889 KLHL30-AS1Q8NEE0 82 aa7.15□□□□□ -1.27
CLIP1-218ENST00000545889 Q96M66 194 aa7.15□□□□□ -1.27
CLIP1-218ENST00000545889 GPR82Q96P67 336 aa7.15□□□□□ -1.27
CLIP1-218ENST00000545889 TMEM222Q9H0R3 208 aa7.15□□□□□ -1.27
CLIP1-218ENST00000545889 PARLQ9H300 379 aa7.15□□□□□ -1.27
CLIP1-218ENST00000545889 MBD3L4A6NDZ8 208 aaPredicted RBP7.15□□□□□ -1.27
CLIP1-218ENST00000545889 MBD3L3A6NE82 208 aaPredicted RBP7.15□□□□□ -1.27
CLIP1-218ENST00000545889 MBD3L5A6NJ08 208 aaPredicted RBP7.15□□□□□ -1.27
CLIP1-218ENST00000545889 C8orf88P0DMB2 117 aa7.15□□□□□ -1.27
CLIP1-218ENST00000545889 ZNF146Q15072 292 aa7.15□□□□□ -1.27
CLIP1-218ENST00000545889 MBD3L2Q8NHZ7 208 aaPredicted RBP7.15□□□□□ -1.27
CLIP1-218ENST00000545889 GEMIN7Q9H840 131 aaKnown RBP7.15□□□□□ -1.27
CLIP1-218ENST00000545889 TNFRSF18Q9Y5U5 241 aa7.15□□□□□ -1.27
CLIP1-218ENST00000545889 ISLRO14498 428 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 NPFFO15130 113 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 TNFSF13O75888 250 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 MSMBP08118 114 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 SRP19P09132 144 aaKnown RBP7.14□□□□□ -1.27
CLIP1-218ENST00000545889 SUMO2P61956 95 aaKnown RBP7.14□□□□□ -1.27
CLIP1-218ENST00000545889 PRSS8Q16651 343 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 LCNL1Q6ZST4 164 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 ORAOV1Q8WV07 137 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 SRSF12Q8WXF0 261 aaKnown RBP7.14□□□□□ -1.27
CLIP1-218ENST00000545889 TMEM101Q96IK0 257 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 TMEM204Q9BSN7 226 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 A0A087WWC5 75 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 TMEM238LA0A1B0GVL6 79 aa7.14□□□□□ -1.27
CLIP1-218ENST00000545889 IL6RP08887 468 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-218ENST00000545889 NTF4P34130 210 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms