RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 SCN7AQ01118 1682 aa4.17□□□□□ -1.74
UBE4A-203ENST00000545354 KNCNA6PVL3 124 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 SNURFLB1AK76 121 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 M0QYG6 137 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 NDUFB2O95178 105 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 CPSF4O95639 269 aaKnown RBP4.16□□□□□ -1.74
UBE4A-203ENST00000545354 PLAUP00749 431 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 COX6A1P12074 109 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 HLA-DRB4P13762 266 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 ZNF20P17024 532 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 CA6P23280 308 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 CLDN17P56750 224 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 SP4Q02446 784 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 RPL18AQ02543 176 aaKnown RBP4.16□□□□□ -1.74
UBE4A-203ENST00000545354 Q6P435 159 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 PRR15Q8IV56 129 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 OR5AS1Q8N127 324 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 OR2A1Q8NGT9 310 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 TMEM190Q8WZ59 177 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 LINC01600Q96MT4 127 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 NMNAT3Q96T66 252 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 HLA-DRB4X5D2U9 266 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 DENND4CQ5VZ89 1909 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 LAMA2P24043 3122 aaKnown RBP4.16□□□□□ -1.74
UBE4A-203ENST00000545354 TRAV8-2A0A0B4J237 113 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 TRAV8-4A0A0B4J246 113 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 NDUFS7O75251 213 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 FKBP2P26885 142 aaKnown RBP4.16□□□□□ -1.74
UBE4A-203ENST00000545354 INSL3P51460 131 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 HERV-K104P61576 105 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 UBE2L3P68036 154 aaKnown RBP4.16□□□□□ -1.74
UBE4A-203ENST00000545354 EFEMP1Q12805 493 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 HMGN2P46Q86SG4 172 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 HAPLN4Q86UW8 402 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 NABP1Q96AH0 204 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 PRR13Q9NZ81 148 aa4.16□□□□□ -1.74
UBE4A-203ENST00000545354 C19orf25Q9UFG5 118 aaPredicted RBP4.16□□□□□ -1.74
UBE4A-203ENST00000545354 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.74
UBE4A-203ENST00000545354 IZUMO1RA6ND01 250 aa4.15□□□□□ -1.74
UBE4A-203ENST00000545354 LEPROTL1O95214 131 aa4.15□□□□□ -1.74
UBE4A-203ENST00000545354 AMY1AP04745 511 aa4.15□□□□□ -1.74
UBE4A-203ENST00000545354 RPS11P62280 158 aaKnown RBP eCLIP4.15□□□□□ -1.74
UBE4A-203ENST00000545354 TRNP1Q6NT89 227 aa4.15□□□□□ -1.74
UBE4A-203ENST00000545354 PIANPQ8IYJ0 282 aa4.15□□□□□ -1.74
UBE4A-203ENST00000545354 CARD19Q96LW7 228 aa4.15□□□□□ -1.74
UBE4A-203ENST00000545354 SHANK2-AS3Q9BTD1 123 aa4.15□□□□□ -1.74
UBE4A-203ENST00000545354 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.74
UBE4A-203ENST00000545354 FAM60AQ9NP50 221 aa4.15□□□□□ -1.74
UBE4A-203ENST00000545354 CKLFQ9UBR5 152 aa4.15□□□□□ -1.74
UBE4A-203ENST00000545354 RPUSD1Q9UJJ7 312 aaKnown RBP4.15□□□□□ -1.74
UBE4A-203ENST00000545354 TRBV7-6A0A0J9YX20 115 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 TCRBV5S4A2TA0A5A2 114 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 hDV102S1A0JD36 115 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 RBAKDNA6NC62 111 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 EPM2AB3EWF7 344 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 H3BT86 120 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 PGLYRP1O75594 196 aaPredicted RBP4.15□□□□□ -1.75
UBE4A-203ENST00000545354 WISP3O95389 354 aaPredicted RBP4.15□□□□□ -1.75
UBE4A-203ENST00000545354 IGKCP01834 107 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 FBXW4P57775 412 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 RPL30P62888 115 aaKnown RBP4.15□□□□□ -1.75
UBE4A-203ENST00000545354 RPL38P63173 70 aaKnown RBP4.15□□□□□ -1.75
UBE4A-203ENST00000545354 QRFPP83859 136 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 FAM27E3Q08E93 113 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 INSL4Q14641 139 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 BEAN1Q3B7T3 259 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 EBLN2Q6P2I7 272 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 RPTNQ6XPR3 784 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 MMD2Q8IY49 270 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 Q8NA96 180 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 OR2T6Q8NHC8 308 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 FAM57AQ8TBR7 257 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 ZPLD1Q8TCW7 415 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 CHCHD5Q9BSY4 110 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 SLC25A2Q9BXI2 301 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 SRXN1Q9BYN0 137 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 PDFQ9HBH1 243 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 OCIAD1Q9NX40 245 aa4.15□□□□□ -1.75
UBE4A-203ENST00000545354 ADM5C9JUS6 153 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 LINC01619G3V211 115 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 H3BS24 57 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 OXTP01178 125 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 GHRHP01286 108 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 IL4P05112 153 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 CCL8P80075 99 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 DPTQ07507 201 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 ARL16Q0P5N6 197 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 FOXF2Q12947 444 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 LGALS9BQ3B8N2 356 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 STPG1Q5TH74 334 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 DGAT2L6Q6ZPD8 337 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 NFE4Q86UQ8 179 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 RNF182Q8N6D2 247 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 NT5CQ8TCD5 201 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 PHLDA1Q8WV24 401 aaPredicted RBP4.14□□□□□ -1.75
UBE4A-203ENST00000545354 ZNF689Q96CS4 500 aaPredicted RBP4.14□□□□□ -1.75
UBE4A-203ENST00000545354 HDHD3Q9BSH5 251 aaPredicted RBP4.14□□□□□ -1.75
UBE4A-203ENST00000545354 APOOQ9BUR5 198 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 AICDAQ9GZX7 198 aa4.14□□□□□ -1.75
UBE4A-203ENST00000545354 PHPT1Q9NRX4 125 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms