RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 CGB3P0DN86 165 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 CGB7P0DN87 165 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 COX5BP10606 129 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 PSKH1P11801 424 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 HIST1H1CP16403 213 aaKnown RBP2.31□□□□□ -2.04
SNHG1-222ENST00000545308 ZNF14P17017 642 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-222ENST00000545308 SULT1A2P50226 295 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 MP68P56378 58 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 MED21Q13503 144 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 ZNF141Q15928 474 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 SLC36A2Q495M3 483 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 C3orf62Q6ZUJ4 267 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 NEGR1Q7Z3B1 354 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 TMEM144Q7Z5S9 345 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 CTAGE3PQ8IX95 158 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 ZFP82Q8N141 532 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 ZNF283Q8N7M2 679 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 OR51D1Q8NGF3 324 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 OR11L1Q8NGX0 322 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 MFSD8Q8NHS3 518 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 STOML3Q8TAV4 291 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 SDF2Q99470 211 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 CDCA4Q9BXL8 241 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 DPY30Q9C005 99 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 CHST5Q9GZS9 411 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 NSRP1Q9H0G5 558 aaKnown RBP2.31□□□□□ -2.04
SNHG1-222ENST00000545308 VSIRQ9H7M9 311 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 CACYBPQ9HB71 228 aaKnown RBP2.31□□□□□ -2.04
SNHG1-222ENST00000545308 SPANXB1Q9NS25 103 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-222ENST00000545308 TMEM106BQ9NUM4 274 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 FGFR1OP2Q9NVK5 253 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 FAM206AQ9NX38 181 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 VPREB3Q9UKI3 123 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 GUCA1BQ9UMX6 200 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 TP53TG1Q9Y2A0 90 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 NOP16Q9Y3C1 178 aaKnown RBP2.31□□□□□ -2.04
SNHG1-222ENST00000545308 POLR3HQ9Y535 204 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-222ENST00000545308 LYSTQ99698 3801 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 TINCRA0A1B0GVN0 87 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 C17orf51A8MQB3 221 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 TMEM114B3SHH9 223 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 IGLL5B9A064 214 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 K7ERS5 55 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 CCRL2O00421 344 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 BIRC5O15392 142 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 SSNA1O43805 119 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 SOX14O95416 240 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 IGHV1-69P01742 117 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 PMELP40967 661 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 MAGEA2P43356 314 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 SRP9P49458 86 aaKnown RBP2.3□□□□□ -2.04
SNHG1-222ENST00000545308 GDI2P50395 445 aaKnown RBP2.3□□□□□ -2.04
SNHG1-222ENST00000545308 RAB2AP61019 212 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 FGF12P61328 243 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 TNFAIP6P98066 277 aaPredicted RBP2.3□□□□□ -2.04
SNHG1-222ENST00000545308 SKP2Q13309 424 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 ZNF181Q2M3W8 571 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 HLA-DRB5Q30154 266 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 PDZD11Q5EBL8 140 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 MRPL2Q5T653 305 aaKnown RBP2.3□□□□□ -2.04
SNHG1-222ENST00000545308 LAIR2Q6ISS4 152 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 BRD3OSQ6XYD6 125 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 HMGN2P46Q86SG4 172 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 LRP11Q86VZ4 500 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 SLC30A7Q8NEW0 376 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 CDC26Q8NHZ8 85 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 CYGBQ8WWM9 190 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 PPCDCQ96CD2 204 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 CMTM5Q96DZ9 223 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 REEP6Q96HR9 211 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 MRPL57Q9BQC6 102 aaKnown RBP2.3□□□□□ -2.04
SNHG1-222ENST00000545308 SHANK2-AS3Q9BTD1 123 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 TSSK6Q9BXA6 273 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 CYTL1Q9NRR1 136 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 INIPQ9NRY2 104 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 ZNF586Q9NXT0 402 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 CALML5Q9NZT1 146 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 PCTPQ9UKL6 214 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 MUC4Q99102 2169 aa2.3□□□□□ -2.04
SNHG1-222ENST00000545308 IGKV1OR2-108A0A075B7D4 117 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 TRAV38-1A0A0B4J264 116 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 F5H5P2 479 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 PGRMC1O00264 195 aaKnown RBP2.29□□□□□ -2.04
SNHG1-222ENST00000545308 AHSA1O95433 338 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 TRGV3P03979 118 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 IGLV7-43P04211 117 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 IFNA6P05013 189 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 CFL1P23528 166 aaKnown RBP2.29□□□□□ -2.04
SNHG1-222ENST00000545308 PHBP35232 272 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 SERPINB9P50453 376 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 PCBD1P61457 104 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 RBX1P62877 108 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 HPCAP84074 193 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 CAV1Q03135 178 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 ENDOGQ14249 297 aaKnown RBP2.29□□□□□ -2.04
SNHG1-222ENST00000545308 LY6EQ16553 131 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 OGFRL1Q5TC84 451 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-222ENST00000545308 DNM1P34Q6PK57 102 aa2.29□□□□□ -2.04
SNHG1-222ENST00000545308 CALHM3Q86XJ0 350 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms