RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 TYMSP04818 313 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 ESDP10768 282 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 SELLP14151 372 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 GATA2P23769 480 aaPredicted RBP4.76□□□□□ -1.65
VPS50-220ENST00000544910 TBR1Q16650 682 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 Q6AWC8 147 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 HAPLN4Q86UW8 402 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 PGPEP1LA6NFU8 196 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 IGLV1-44P01699 117 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 HSD52Q0P140 79 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 GFI1BQ5VTD9 330 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 ZNF474Q6S9Z5 364 aaPredicted RBP4.76□□□□□ -1.65
VPS50-220ENST00000544910 LPAR2Q9HBW0 351 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 C1RLQ9NZP8 487 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 RPUSD1Q9UJJ7 312 aaKnown RBP4.76□□□□□ -1.65
VPS50-220ENST00000544910 C15orf65H3BRN8 121 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 GFRA3O60609 400 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 PSG9Q00887 426 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 CD69Q07108 199 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 FOXL1Q12952 345 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 MUC15Q8N387 334 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 LINC01560Q8TB33 94 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 CHCHD1Q96BP2 118 aaKnown RBP4.75□□□□□ -1.65
VPS50-220ENST00000544910 TCRBV4S1A1TA0A5B7 111 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 TMEM200BQ69YZ2 307 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 OR9G4Q8NGQ1 327 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 SPRY4Q9C004 299 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 FNDC4Q9H6D8 234 aaPredicted RBP4.75□□□□□ -1.65
VPS50-220ENST00000544910 FNDC10F2Z333 226 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 IGHV3-48P01763 117 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 CIRBPQ14011 172 aaKnown RBP4.75□□□□□ -1.65
VPS50-220ENST00000544910 TEX38Q6PEX7 206 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 LINC01551Q86U37 167 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 OCC1Q8TAD7 63 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 C11orf1Q9H5F2 150 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 LOC105371242A0A075B767 164 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 A0A1B0GWJ7 208 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 C9JCJ5 164 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 H0YJW9 148 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 GPR6P46095 362 aaPredicted RBP4.75□□□□□ -1.65
VPS50-220ENST00000544910 SLC25A48Q6ZT89 311 aaKnown RBP4.75□□□□□ -1.65
VPS50-220ENST00000544910 OR10W1Q8NGF6 305 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 Q8TCH9 128 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 SLC25A2Q9BXI2 301 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 OSTCQ9NRP0 149 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 A0A0G2JNJ9 132 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 MGPP08493 103 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 TFPI2P48307 235 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 LINC01559Q495D7 138 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 ZFAND6Q6FIF0 208 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 SSBP3Q9BWW4 388 aaPredicted RBP4.75□□□□□ -1.65
VPS50-220ENST00000544910 TMEM133Q9H2Q1 129 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 Q9UFV3 132 aa4.75□□□□□ -1.65
VPS50-220ENST00000544910 RP1P56715 2156 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 GATA4P43694 442 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 PAPPA-AS1Q5QFB9 102 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 FAM71F2Q6NXP2 309 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 ZNF664Q8N3J9 261 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 TEX45Q8NA69 505 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 SRSF12Q8WXF0 261 aaKnown RBP4.74□□□□□ -1.65
VPS50-220ENST00000544910 TMEM190Q8WZ59 177 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 RNASE7Q9H1E1 156 aaKnown RBP4.74□□□□□ -1.65
VPS50-220ENST00000544910 SEPSECSQ9HD40 501 aaKnown RBP4.74□□□□□ -1.65
VPS50-220ENST00000544910 A0A1W2PRE2 83 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 TMEM178BH3BS89 294 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 H7C2G1 150 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 MYOD1P15172 320 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 MFAP4P55083 255 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 ECSCRQ19T08 205 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 C17orf58Q2M2W7 97 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 FAM53AQ6NSI3 398 aaPredicted RBP4.74□□□□□ -1.65
VPS50-220ENST00000544910 RASL11AQ6T310 242 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 RBPMS2Q6ZRY4 209 aaKnown RBP4.74□□□□□ -1.65
VPS50-220ENST00000544910 Q6ZS92 163 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 C11orf53Q8IXP5 236 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 ZNF418Q8TF45 676 aaPredicted RBP4.74□□□□□ -1.65
VPS50-220ENST00000544910 C20orf144Q9BQM9 153 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 LY96Q9Y6Y9 160 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 TMSB15BA0A087X1C1 80 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 APOMO95445 188 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 APOHP02749 345 aaPredicted RBP4.74□□□□□ -1.65
VPS50-220ENST00000544910 FAM106CPP0CH98 169 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 A0A1W2PNU3 283 aaPredicted RBP4.74□□□□□ -1.65
VPS50-220ENST00000544910 H3BTX0 84 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 PPP1R17O96001 155 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 IGHV2-5P01817 119 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 GZMBP10144 247 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 KLRB1Q12918 225 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 SAMD5Q5TGI4 173 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 ST6GALNAC6Q969X2 333 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 NEU1Q99519 415 aa4.74□□□□□ -1.65
VPS50-220ENST00000544910 IGLV2-14P01704 120 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 FCGR2BP31994 310 aaPredicted RBP4.73□□□□□ -1.65
VPS50-220ENST00000544910 GAGE13Q4V321 117 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 IGFL3Q6UXB1 125 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 PIP4P1Q86T03 277 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 FAM19A2Q8N3H0 131 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 ST6GALNAC3Q8NDV1 305 aa4.73□□□□□ -1.65
VPS50-220ENST00000544910 TNFRSF14Q92956 283 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms