RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	TRBV6-6	A0A0A6YYG2	114 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	LOC100131303	A0A0U1RQF7	123 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	NAPSA	O96009	420 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	C8orf88	P0DMB2	117 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	HNRNPA3	P51991	378 aa	Known RBP	4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	VMA21	Q3ZAQ7	101 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585		Q499Y3	187 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	LAMTOR1	Q6IAA8	161 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	TMPRSS11A	Q6ZMR5	421 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	C19orf35	Q6ZS72	473 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	MOB1B	Q7L9L4	216 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	CSNK1G2-AS1	Q8NCQ2	148 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	VN1R17P	Q8TDU5	208 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	GIMAP1	Q8WWP7	306 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	SPIN2A	Q99865	258 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	RARRES2	Q99969	163 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	SPIN2B	Q9BPZ2	258 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	FAAP24	Q9BTP7	215 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	GEMIN7	Q9H840	131 aa	Known RBP	4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	PLGRKT	Q9HBL7	147 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	BABAM2	Q9NXR7	383 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	APLN	Q9ULZ1	77 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	RPL36	Q9Y3U8	105 aa	Known RBP	4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	ORC6	Q9Y5N6	252 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	DNAH10	Q8IVF4	4471 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	HERC1	Q15751	4861 aa		4.38	□□□□□ -1.71
CPSF7-222	ENST00000544585	KMT2A	Q03164	3969 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585		A8MWP6	167 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	EPM2A	B3EWF7	344 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	IGLL5	B9A064	214 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	PPP5D1	E7EU14	171 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585		M0R1X1	148 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	CREBL2	O60519	120 aa	Predicted RBP	4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	TMEM50A	O95807	157 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	DHFR	P00374	187 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	UBB	P0CG47	229 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	APELA	P0DMC3	54 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	DCK	P27707	260 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	RPL29	P47914	159 aa	Known RBP	4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	UBE2K	P61086	200 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	RPL32	P62910	135 aa	Known RBP	4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	DEFA5	Q01523	94 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	TNXA	Q16473	311 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	PRSS8	Q16651	343 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	RTL8B	Q17RB0	113 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	C15orf32	Q32M92	178 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	YIF1B	Q5BJH7	314 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	RBM48	Q5RL73	367 aa	Known RBP	4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	CYGB	Q8WWM9	190 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	SRSF12	Q8WXF0	261 aa	Known RBP	4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	UQCC2	Q9BRT2	126 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	C20orf24	Q9BUV8	137 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	RBKS	Q9H477	322 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	AUNIP	Q9H7T9	357 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	PLEKHJ1	Q9NW61	149 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	ZNF257	Q9Y2Q1	563 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	ABCA13	Q86UQ4	5058 aa		4.37	□□□□□ -1.71
CPSF7-222	ENST00000544585	TRBV7-1	A0A0A6YYK4	115 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585		A0A1B0GVG6	124 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	NDUFAF8	A1L188	74 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	TMEM213	A2RRL7	107 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	BOLA2-SMG1P6	H3BVE0	249 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	PFDN1	O60925	122 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	OR2J3	O76001	311 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	HLA-A	P01891	365 aa	Known RBP	4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	PRH1	P02810	166 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	LIMS3	P0CW19	117 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	LIMS4	P0CW20	117 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	HIST1H1B	P16401	226 aa	Known RBP	4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	PSMB6	P28072	239 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	SERPINB10	P48595	397 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	TMBIM6	P55061	237 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	SSX1	Q16384	188 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	MRGPRG-AS1	Q2M3A8	158 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	KLK9	Q2XQG4	91 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	UFSP1	Q6NVU6	142 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	ZNF773	Q6PK81	442 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	CLEC19A	Q6UXS0	136 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	C6orf201	Q7Z4U5	140 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	ZNF555	Q8NEP9	628 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	OR52I1	Q8NGK6	324 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	RHOXF1	Q8NHV9	184 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	ACOT12	Q8WYK0	555 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	UFD1	Q92890	307 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	EEF1AKMT3	Q96AZ1	226 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	SMIM19	Q96E16	107 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	SEC22A	Q96IW7	307 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	ADTRP	Q96IZ2	230 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	C11orf68	Q9H3H3	251 aa	Known RBP	4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	FGF20	Q9NP95	211 aa	Predicted RBP	4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	KLK9	Q9UKQ9	250 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	UFC1	Q9Y3C8	167 aa		4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.36	□□□□□ -1.71
CPSF7-222	ENST00000544585	TRAV8-7	A0A075B6U6	113 aa		4.35	□□□□□ -1.71
CPSF7-222	ENST00000544585	TRAV9-2	A0A087WT02	112 aa		4.35	□□□□□ -1.71
CPSF7-222	ENST00000544585	KRTAP4-8	A0A0G2JLE6	195 aa		4.35	□□□□□ -1.71
CPSF7-222	ENST00000544585	OR4C46	A6NHA9	309 aa		4.35	□□□□□ -1.71
CPSF7-222	ENST00000544585		H7C423	109 aa		4.35	□□□□□ -1.71
CPSF7-222	ENST00000544585	LALBA	P00709	142 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 76 ms