RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 PAX9P55771 341 aa6.34□□□□□ -1.4
TRIM59-208ENST00000543469 RUNX1Q01196 453 aa6.34□□□□□ -1.4
TRIM59-208ENST00000543469 FLI1Q01543 452 aaPredicted RBP6.34□□□□□ -1.4
TRIM59-208ENST00000543469 C10orf55Q5SWW7 151 aa6.34□□□□□ -1.4
TRIM59-208ENST00000543469 ARL6IP6Q8N6S5 226 aa6.34□□□□□ -1.4
TRIM59-208ENST00000543469 C5orf30Q96GV9 206 aa6.34□□□□□ -1.4
TRIM59-208ENST00000543469 SEC14L6B5MCN3 397 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 LINC01619G3V211 115 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 IGHV4-59P01825 116 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 Q5BKY6 102 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 FAM162BQ5T6X4 162 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 C11orf42Q8N5U0 333 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 RCC1LQ96I51 464 aaKnown RBP6.33□□□□□ -1.4
TRIM59-208ENST00000543469 FAM103A1Q9BTL3 118 aaKnown RBP6.33□□□□□ -1.4
TRIM59-208ENST00000543469 CRIP2P52943 208 aaPredicted RBP6.33□□□□□ -1.4
TRIM59-208ENST00000543469 MEF2BQ02080 365 aaPredicted RBP6.33□□□□□ -1.4
TRIM59-208ENST00000543469 CYTL1Q9NRR1 136 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 RPH3ALQ9UNE2 315 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 CACNA1AO00555 2505 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 RNASE1P07998 156 aaKnown RBP6.33□□□□□ -1.4
TRIM59-208ENST00000543469 LGALS1P09382 135 aaKnown RBP6.33□□□□□ -1.4
TRIM59-208ENST00000543469 TMEM78Q5T7P6 136 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 SPATA31B1PQ5VZV4 182 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 C1QL4Q86Z23 238 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 TMEM14CQ9P0S9 112 aa6.33□□□□□ -1.4
TRIM59-208ENST00000543469 TLN1Q9Y490 2541 aaKnown RBP6.33□□□□□ -1.4
TRIM59-208ENST00000543469 IGLV11-55A0A075B6I3 123 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 H7BYZ3 331 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 OVOL1O14753 267 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 NDUFA7O95182 113 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 CLEC3BP05452 202 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 NMBP08949 121 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 AREGP15514 252 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 TAS2R60P59551 318 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 DIAPH2-AS1Q14236 149 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 PIP4P2Q8N4L2 257 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 UBE2E2Q96LR5 201 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 SERTAD4Q9NUC0 356 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 FAM208BQ5VWN6 2430 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 TANC2Q9HCD6 1990 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 PRB3Q04118 309 aaPredicted RBP6.32□□□□□ -1.4
TRIM59-208ENST00000543469 WT1-ASQ06250 92 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 PMS2P11Q13670 270 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 ADIRFQ15847 76 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 MAPK1IP1LQ8NDC0 245 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 RPS10P5Q9NQ39 176 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 DAZ1Q9NQZ3 744 aaKnown RBP6.32□□□□□ -1.4
TRIM59-208ENST00000543469 RPRMQ9NS64 109 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 PUS1Q9Y606 427 aaKnown RBP eCLIP6.32□□□□□ -1.4
TRIM59-208ENST00000543469 IGHV3-21A0A0B4J1V1 117 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 LOC102723971A0A1B0GUV8 181 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 NBEAP1P0C6P0 100 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 CNTFRP26992 372 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 EIF4E3Q8N5X7 224 aaKnown RBP6.32□□□□□ -1.4
TRIM59-208ENST00000543469 BLNKQ8WV28 456 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 MGST2Q99735 147 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 CLPSL1A2RUU4 121 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 OR2T8A6NH00 312 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 STAG3L2P0CL84 134 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 STAG3L3P0CL85 134 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 MGST1P10620 155 aaKnown RBP6.32□□□□□ -1.4
TRIM59-208ENST00000543469 PLP1P60201 277 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 UBE2G2P60604 165 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 C12orf54Q6X4T0 127 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 FMC1Q96HJ9 113 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 RAX2Q96IS3 184 aa6.32□□□□□ -1.4
TRIM59-208ENST00000543469 ICE1Q9Y2F5 2266 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 MALRD1Q5VYJ5 2156 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 SH2D7A6NKC9 451 aaPredicted RBP6.31□□□□□ -1.4
TRIM59-208ENST00000543469 HAX1O00165 279 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 PAGE4O60829 102 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 SFTA3P0C7M3 94 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 ARL14EPLP0DKL9 152 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 SHANK2-AS3Q9BTD1 123 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 ANKRD11Q6UB99 2663 aaPredicted RBP6.31□□□□□ -1.4
TRIM59-208ENST00000543469 FAM74A7A6NL05 159 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 K7EMT4 169 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 AMBPP02760 352 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 NUTF2P61970 127 aaKnown RBP6.31□□□□□ -1.4
TRIM59-208ENST00000543469 MRPL27Q9P0M9 148 aaKnown RBP6.31□□□□□ -1.4
TRIM59-208ENST00000543469 TEX22C9J3V5 150 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 OR2C1O95371 312 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 LEPP41159 167 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.31□□□□□ -1.4
TRIM59-208ENST00000543469 SMIM12Q96EX1 92 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 WFDC1Q9HC57 220 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 PLCE1Q9P212 2302 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 YLPM1P49750 1951 aaKnown RBP6.31□□□□□ -1.4
TRIM59-208ENST00000543469 PKDREJQ9NTG1 2253 aa6.31□□□□□ -1.4
TRIM59-208ENST00000543469 FCN1O00602 326 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 S100A6P06703 90 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 PSG1P11464 419 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 CD300CQ08708 224 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 BSXQ3C1V8 233 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 TM4SF20Q53R12 229 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 KLHDC1Q8N7A1 406 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 OR1N2Q8NGR9 330 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 OR2K2Q8NGT1 345 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 DUX5Q96PT3 197 aa6.3□□□□□ -1.4
TRIM59-208ENST00000543469 PRDM13Q9H4Q3 707 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms