RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PYDC2Q56P42 97 aa9.65□□□□□ -0.86
TNFRSF1A-215ENST00000543359 FAM24BQ8N5W8 94 aa9.65□□□□□ -0.86
TNFRSF1A-215ENST00000543359 SLC24A4Q8NFF2 622 aa9.65□□□□□ -0.86
TNFRSF1A-215ENST00000543359 IL17DQ8TAD2 202 aa9.65□□□□□ -0.86
TNFRSF1A-215ENST00000543359 AGRNO00468 2067 aa9.65□□□□□ -0.87
TNFRSF1A-215ENST00000543359 TRAV30A0A087WSZ9 112 aa9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 TRAV2A0A0B4J234 112 aa9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 ZNF701M0R085 212 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 SLC25A4P12235 298 aa9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 NPPCP23582 126 aa9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 BMI1P35226 326 aa9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 CMC4P56277 68 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 YPEL3P61236 119 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 SMCO1Q147U7 214 aa9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 TOMM5Q8N4H5 51 aa9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 STPG3Q8N7X2 389 aa9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 RBKSQ9H477 322 aa9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 CACFD1Q9UGQ2 172 aa9.64□□□□□ -0.87
TNFRSF1A-215ENST00000543359 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 RPS10-NUDT3A0A1W2PQS6 291 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 NPY1RP25929 384 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 OR10J1P30954 320 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 RND2P52198 227 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 PAFAH1B2P68402 229 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 SRPXP78539 464 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 RBMS2Q15434 407 aaKnown RBP9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 TMEM128Q5BJH2 165 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 LGI3Q8N145 548 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 LRTM2Q8N967 370 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 DEDD2Q8WXF8 326 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 METTL26Q96S19 204 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 U3KQ87 197 aa9.63□□□□□ -0.87
TNFRSF1A-215ENST00000543359 A0A0J9YWU9 116 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 A0A1W2PS18 150 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 CCDC160A6NGH7 325 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 K7EQG2 157 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 ANXA3P12429 323 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 FAUP35544 74 aaKnown RBP9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 P2RY1P47900 373 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 AP3S2P59780 193 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 TMED4Q7Z7H5 227 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 LYG2Q86SG7 212 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 DTD1Q8TEA8 209 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 DCANP1Q8TF63 244 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 NPIPB3Q92617 1050 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 SLC25A21Q9BQT8 299 aaPredicted RBP9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 SRRQ9GZT4 340 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 CSTL1Q9H114 145 aa9.62□□□□□ -0.87
TNFRSF1A-215ENST00000543359 DNAH6Q9C0G6 4158 aa9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 DUXBA0A1W2PPF3 345 aa9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 GIG44P09565 113 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 ATF4P18848 351 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 S100A5P33763 92 aa9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 ATP5IP56385 69 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 DEFB131AP59861 70 aa9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 USF2Q15853 346 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 BAK1Q16611 211 aa9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 ETFRF1Q6IPR1 90 aa9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 C16orf54Q6UWD8 224 aa9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 NOXA1Q86UR1 476 aa9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 GLMPQ8WWB7 406 aa9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 SDHCQ99643 169 aaPredicted RBP9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 TMEM231Q9H6L2 316 aa9.61□□□□□ -0.87
TNFRSF1A-215ENST00000543359 IGKV1D-37A0A075B6S9 117 aa9.6□□□□□ -0.87
TNFRSF1A-215ENST00000543359 MPTX1A8MV57 137 aa9.6□□□□□ -0.87
TNFRSF1A-215ENST00000543359 DNASE2O00115 360 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-215ENST00000543359 TOMM40O96008 361 aa9.6□□□□□ -0.87
TNFRSF1A-215ENST00000543359 IFNA10P01566 189 aa9.6□□□□□ -0.87
TNFRSF1A-215ENST00000543359 SLC25A6P12236 298 aa9.6□□□□□ -0.87
TNFRSF1A-215ENST00000543359 GPX4P36969 197 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF1A-215ENST00000543359 PPP1R1AQ13522 171 aa9.6□□□□□ -0.87
TNFRSF1A-215ENST00000543359 LEMD1Q68G75 181 aa9.6□□□□□ -0.87
TNFRSF1A-215ENST00000543359 Q8WTZ3 238 aa9.6□□□□□ -0.87
TNFRSF1A-215ENST00000543359 ACY3Q96HD9 319 aa9.6□□□□□ -0.87
TNFRSF1A-215ENST00000543359 GRAMD2BQ96HH9 432 aa9.6□□□□□ -0.87
TNFRSF1A-215ENST00000543359 SCGB2A1O75556 95 aa9.59□□□□□ -0.87
TNFRSF1A-215ENST00000543359 SFT2D2O95562 160 aa9.59□□□□□ -0.87
TNFRSF1A-215ENST00000543359 HNRNPCP07910 306 aaKnown RBP eCLIP9.59□□□□□ -0.87
TNFRSF1A-215ENST00000543359 RD3LP0DJH9 198 aa9.59□□□□□ -0.87
TNFRSF1A-215ENST00000543359 PSG1P11464 419 aa9.59□□□□□ -0.87
TNFRSF1A-215ENST00000543359 RPL11P62913 178 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-215ENST00000543359 GAMTQ14353 236 aa9.59□□□□□ -0.87
TNFRSF1A-215ENST00000543359 OR1S1Q8NH92 325 aa9.59□□□□□ -0.87
TNFRSF1A-215ENST00000543359 DNAH2Q9P225 4427 aa9.59□□□□□ -0.87
TNFRSF1A-215ENST00000543359 BIRC6Q9NR09 4857 aa9.58□□□□□ -0.88
TNFRSF1A-215ENST00000543359 FAM90A26D6RGX4 464 aa9.58□□□□□ -0.88
TNFRSF1A-215ENST00000543359 BUB3O43684 328 aa9.58□□□□□ -0.88
TNFRSF1A-215ENST00000543359 IL4P05112 153 aa9.58□□□□□ -0.88
TNFRSF1A-215ENST00000543359 SPANXN2Q5MJ10 180 aa9.58□□□□□ -0.88
TNFRSF1A-215ENST00000543359 STXBP6Q8NFX7 210 aa9.58□□□□□ -0.88
TNFRSF1A-215ENST00000543359 GATAD1Q8WUU5 269 aa9.58□□□□□ -0.88
TNFRSF1A-215ENST00000543359 RABAC1Q9UI14 185 aa9.58□□□□□ -0.88
TNFRSF1A-215ENST00000543359 TMED3Q9Y3Q3 217 aa9.58□□□□□ -0.88
TNFRSF1A-215ENST00000543359 PIGBOS1A0A0B4J2F0 54 aa9.57□□□□□ -0.88
TNFRSF1A-215ENST00000543359 PRSS46E5RG02 174 aa9.57□□□□□ -0.88
TNFRSF1A-215ENST00000543359 IFNA4P05014 189 aa9.57□□□□□ -0.88
TNFRSF1A-215ENST00000543359 VAMP1P23763 118 aa9.57□□□□□ -0.88
TNFRSF1A-215ENST00000543359 UBE2MP61081 183 aaKnown RBP9.57□□□□□ -0.88
TNFRSF1A-215ENST00000543359 ZNF90Q03938 601 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms