RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 PLEKHB2Q96CS7 222 aa16.31■□□□□ 0.2
HDAC4-215ENST00000543185 TMEM8BA6NDV4 472 aa16.31■□□□□ 0.2
HDAC4-215ENST00000543185 TRBV20-1A0A075B6N2 111 aa16.3■□□□□ 0.2
HDAC4-215ENST00000543185 LINC01565O15544 149 aa16.3■□□□□ 0.2
HDAC4-215ENST00000543185 OR9G9P0C7N8 305 aa16.3■□□□□ 0.2
HDAC4-215ENST00000543185 TPTE2P1Q5T6R2 138 aa16.3■□□□□ 0.2
HDAC4-215ENST00000543185 AGRNO00468 2067 aa16.3■□□□□ 0.2
HDAC4-215ENST00000543185 KLF4O43474 513 aa16.3■□□□□ 0.2
HDAC4-215ENST00000543185 TRGV11A0A075B6L2 103 aa16.3■□□□□ 0.2
HDAC4-215ENST00000543185 AMBPP02760 352 aa16.3■□□□□ 0.2
HDAC4-215ENST00000543185 SPRED2Q7Z698 418 aa16.3■□□□□ 0.2
HDAC4-215ENST00000543185 TRAV2A0A0B4J234 112 aa16.3■□□□□ 0.2
HDAC4-215ENST00000543185 ASCL4Q6XD76 172 aa16.3■□□□□ 0.2
HDAC4-215ENST00000543185 TRGV3P03979 118 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-215ENST00000543185 GZMBP10144 247 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 ABHD17AQ96GS6 310 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 AMELYQ99218 206 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 FOXA2Q9Y261 457 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-215ENST00000543185 KIAA1549LQ6ZVL6 1849 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 IGHV3-72A0A0B4J1Y9 119 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 TMEM155Q4W5P6 130 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 OR10W1Q8NGF6 305 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 TOMM7Q9P0U1 55 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 RPRMLQ8N4K4 120 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 PEMTQ9UBM1 199 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 GLRXP35754 106 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 SLC25A39Q9BZJ4 359 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-215ENST00000543185 LEPROTO15243 131 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 PLA2G2FQ9BZM2 168 aa16.29■□□□□ 0.2
HDAC4-215ENST00000543185 ZNF71Q9NQZ8 489 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-215ENST00000543185 SPINK8P0C7L1 97 aa16.28■□□□□ 0.2
HDAC4-215ENST00000543185 CHAC1Q9BUX1 264 aa16.28■□□□□ 0.2
HDAC4-215ENST00000543185 EDA2RQ9HAV5 297 aa16.28■□□□□ 0.2
HDAC4-215ENST00000543185 TGFAP01135 160 aa16.28■□□□□ 0.2
HDAC4-215ENST00000543185 EGR4Q05215 589 aa16.28■□□□□ 0.2
HDAC4-215ENST00000543185 RPL39P5Q59GN2 51 aa16.28■□□□□ 0.2
HDAC4-215ENST00000543185 ZNF826PQ6ZT77 177 aa16.28■□□□□ 0.2
HDAC4-215ENST00000543185 MRPL20Q9BYC9 149 aaKnown RBP16.28■□□□□ 0.2
HDAC4-215ENST00000543185 ATRAIDQ6UW56 229 aa16.28■□□□□ 0.2
HDAC4-215ENST00000543185 C1QTNF5Q9BXJ0 243 aa16.28■□□□□ 0.2
HDAC4-215ENST00000543185 TRAV14DV4A0A0A6YYC5 116 aa16.27■□□□□ 0.2
HDAC4-215ENST00000543185 WBP1LQ9NX94 342 aa16.27■□□□□ 0.2
HDAC4-215ENST00000543185 CDK2AP2O75956 126 aa16.27■□□□□ 0.2
HDAC4-215ENST00000543185 CD28P10747 220 aa16.27■□□□□ 0.2
HDAC4-215ENST00000543185 PLXNA4Q9HCM2 1894 aa16.27■□□□□ 0.2
HDAC4-215ENST00000543185 LINC00271P0C7V0 271 aa16.27■□□□□ 0.2
HDAC4-215ENST00000543185 ATP5G3P48201 142 aa16.27■□□□□ 0.2
HDAC4-215ENST00000543185 IGKV1D-42A0A075B6H8 117 aa16.27■□□□□ 0.19
HDAC4-215ENST00000543185 ZIC4Q8N9L1 334 aa16.27■□□□□ 0.19
HDAC4-215ENST00000543185 C2orf82Q6UX34 121 aa16.27■□□□□ 0.19
HDAC4-215ENST00000543185 CD160O95971 181 aa16.27■□□□□ 0.19
HDAC4-215ENST00000543185 DPM3Q9P2X0 92 aa16.27■□□□□ 0.19
HDAC4-215ENST00000543185 MSGN1A6NI15 193 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 GFRA3O60609 400 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 YPEL1O60688 119 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 YPEL2Q96QA6 119 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 TMEM167AQ8TBQ9 72 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 CST9LQ9H4G1 147 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 COLCA2A8K830 154 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 PEAR1Q5VY43 1037 aaPredicted RBP16.26■□□□□ 0.19
HDAC4-215ENST00000543185 TMEM52Q8NDY8 209 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 TRBV6-7A0A0A0MS04 114 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 C5orf67F2Z3F1 127 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 TOMM40O96008 361 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 DEFB124Q8NES8 71 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 RNF126Q9BV68 326 aa16.26■□□□□ 0.19
HDAC4-215ENST00000543185 ITGB1BP1O14713 200 aa16.25■□□□□ 0.19
HDAC4-215ENST00000543185 CEACAM1P13688 526 aa16.25■□□□□ 0.19
HDAC4-215ENST00000543185 RNF125Q96EQ8 232 aa16.25■□□□□ 0.19
HDAC4-215ENST00000543185 TBX6O95947 436 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-215ENST00000543185 GPHA2Q96T91 129 aa16.25■□□□□ 0.19
HDAC4-215ENST00000543185 COX11Q9Y6N1 276 aa16.25■□□□□ 0.19
HDAC4-215ENST00000543185 ZXDCQ2QGD7 858 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-215ENST00000543185 ATXN7O15265 892 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-215ENST00000543185 HIST1H4AP62805 103 aaKnown RBP16.25■□□□□ 0.19
HDAC4-215ENST00000543185 MESP2Q0VG99 397 aa16.25■□□□□ 0.19
HDAC4-215ENST00000543185 FBXL7Q9UJT9 491 aa16.25■□□□□ 0.19
HDAC4-215ENST00000543185 CD7P09564 240 aa16.25■□□□□ 0.19
HDAC4-215ENST00000543185 IGFBP3P17936 291 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-215ENST00000543185 MIR17HGQ75NE6 70 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 NEGR1Q7Z3B1 354 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 ADAMTS9Q9P2N4 1935 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 SPINK2P20155 84 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 VWC2LB2RUY7 222 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 BCL6BQ8N143 479 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-215ENST00000543185 CCL19Q99731 98 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 A0A0G2JK05 382 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 H3BTX0 84 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 DUSP14O95147 198 aaKnown RBP16.24■□□□□ 0.19
HDAC4-215ENST00000543185 EFNB3Q15768 340 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 ZNF497Q6ZNH5 498 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 FGF11Q92914 225 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 RSPO3Q9BXY4 272 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-215ENST00000543185 GTSF1LQ9H1H1 148 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 TRGV2A0A075B6R0 118 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 C12orf77C9JDV5 145 aa16.24■□□□□ 0.19
HDAC4-215ENST00000543185 SAA1P0DJI8 122 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-215ENST00000543185 PDLIM4P50479 330 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms