RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 STRAPQ9Y3F4 350 aaKnown RBP11.73□□□□□ -0.53
SPTB-205ENST00000542694 PUS1Q9Y606 427 aaKnown RBP eCLIP11.73□□□□□ -0.53
SPTB-205ENST00000542694 IGHV7-4-1A0A0J9YVY3 117 aa11.72□□□□□ -0.53
SPTB-205ENST00000542694 IZUMO1RA6ND01 250 aa11.72□□□□□ -0.53
SPTB-205ENST00000542694 TSPAN4O14817 238 aa11.72□□□□□ -0.53
SPTB-205ENST00000542694 IL5P05113 134 aa11.72□□□□□ -0.53
SPTB-205ENST00000542694 IAPPP10997 89 aa11.72□□□□□ -0.53
SPTB-205ENST00000542694 CD81P60033 236 aa11.72□□□□□ -0.53
SPTB-205ENST00000542694 PAFAH1B2P68402 229 aa11.72□□□□□ -0.53
SPTB-205ENST00000542694 TMEM61Q8N0U2 210 aa11.72□□□□□ -0.53
SPTB-205ENST00000542694 C12orf45Q8N5I9 185 aaPredicted RBP11.72□□□□□ -0.53
SPTB-205ENST00000542694 NPIPB3Q92617 1050 aa11.72□□□□□ -0.53
SPTB-205ENST00000542694 METTL26Q96S19 204 aa11.72□□□□□ -0.53
SPTB-205ENST00000542694 RAB40CQ96S21 281 aa11.72□□□□□ -0.53
SPTB-205ENST00000542694 NEURL2Q9BR09 285 aa11.72□□□□□ -0.53
SPTB-205ENST00000542694 PAIP2BQ9ULR5 123 aaKnown RBP11.72□□□□□ -0.53
SPTB-205ENST00000542694 PRAF2O60831 178 aa11.71□□□□□ -0.53
SPTB-205ENST00000542694 IGHV4-30-4P0DP06 118 aa11.71□□□□□ -0.53
SPTB-205ENST00000542694 TAS2R30P59541 319 aa11.71□□□□□ -0.53
SPTB-205ENST00000542694 OR52B4Q8NGK2 314 aa11.71□□□□□ -0.53
SPTB-205ENST00000542694 OR4D5Q8NGN0 318 aa11.71□□□□□ -0.53
SPTB-205ENST00000542694 TMEM170AQ8WVE7 144 aa11.71□□□□□ -0.53
SPTB-205ENST00000542694 WDR89Q96FK6 387 aaPredicted RBP11.71□□□□□ -0.53
SPTB-205ENST00000542694 ACY3Q96HD9 319 aa11.71□□□□□ -0.53
SPTB-205ENST00000542694 GRAMD2BQ96HH9 432 aa11.71□□□□□ -0.53
SPTB-205ENST00000542694 SMIM8Q96KF7 97 aa11.71□□□□□ -0.53
SPTB-205ENST00000542694 RHPN1-AS1Q9BWJ2 59 aa11.71□□□□□ -0.53
SPTB-205ENST00000542694 MAGT1Q9H0U3 335 aa11.71□□□□□ -0.53
SPTB-205ENST00000542694 GSKIPQ9P0R6 139 aa11.71□□□□□ -0.53
SPTB-205ENST00000542694 OR4C46A6NHA9 309 aa11.7□□□□□ -0.54
SPTB-205ENST00000542694 CHEK1O14757 476 aa11.7□□□□□ -0.54
SPTB-205ENST00000542694 ZNF207O43670 478 aaKnown RBP11.7□□□□□ -0.54
SPTB-205ENST00000542694 SCAF4O95104 1147 aaKnown RBP11.7□□□□□ -0.54
SPTB-205ENST00000542694 IGKV1-17P01599 117 aa11.7□□□□□ -0.54
SPTB-205ENST00000542694 IGLC1P0CG04 106 aa11.7□□□□□ -0.54
SPTB-205ENST00000542694 RD3LP0DJH9 198 aa11.7□□□□□ -0.54
SPTB-205ENST00000542694 EIF2B2P49770 351 aaKnown RBP11.7□□□□□ -0.54
SPTB-205ENST00000542694 SPANXN5Q5MJ07 72 aa11.7□□□□□ -0.54
SPTB-205ENST00000542694 ZBTB8BQ8NAP8 495 aaPredicted RBP11.7□□□□□ -0.54
SPTB-205ENST00000542694 PSENENQ9NZ42 101 aa11.7□□□□□ -0.54
SPTB-205ENST00000542694 IGHV3OR16-8A0A075B7F1 116 aa11.69□□□□□ -0.54
SPTB-205ENST00000542694 C5orf51A6NDU8 294 aa11.69□□□□□ -0.54
SPTB-205ENST00000542694 OR11H12B2RN74 326 aa11.69□□□□□ -0.54
SPTB-205ENST00000542694 CFDP00746 253 aaPredicted RBP11.69□□□□□ -0.54
SPTB-205ENST00000542694 FRMD6-AS1P0C7T7 363 aa11.69□□□□□ -0.54
SPTB-205ENST00000542694 EDN2P20800 178 aa11.69□□□□□ -0.54
SPTB-205ENST00000542694 S100A7P31151 101 aa11.69□□□□□ -0.54
SPTB-205ENST00000542694 NUP62P37198 522 aaPredicted RBP11.69□□□□□ -0.54
SPTB-205ENST00000542694 TIGITQ495A1 244 aa11.69□□□□□ -0.54
SPTB-205ENST00000542694 ZMAT4Q9H898 229 aa11.69□□□□□ -0.54
SPTB-205ENST00000542694 C19orf73Q9NVV2 129 aa11.69□□□□□ -0.54
SPTB-205ENST00000542694 MRPL36Q9P0J6 103 aaKnown RBP11.69□□□□□ -0.54
SPTB-205ENST00000542694 ZFP92A6NM28 416 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 MPTX1A8MV57 137 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 SNRPGP15A8MWD9 76 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 FAM25EA8MYX2 175 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 TOMM40O96008 361 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 CRYBB3P26998 211 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 POLR2GP62487 172 aaKnown RBP eCLIP11.68□□□□□ -0.54
SPTB-205ENST00000542694 GAMTQ14353 236 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 GSG1LQ6UXU4 331 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 C2orf50Q96LR7 162 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 FAM110AQ9BQ89 295 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 SEC22CQ9BRL7 303 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 VSIRQ9H7M9 311 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
SPTB-205ENST00000542694 INMT-MINDY4F8WBC2 141 aa11.67□□□□□ -0.54
SPTB-205ENST00000542694 L7N2F9 121 aa11.67□□□□□ -0.54
SPTB-205ENST00000542694 SSSCA1O60232 199 aa11.67□□□□□ -0.54
SPTB-205ENST00000542694 TSC22D2O75157 780 aa11.67□□□□□ -0.54
SPTB-205ENST00000542694 SCGB1D2O95969 90 aa11.67□□□□□ -0.54
SPTB-205ENST00000542694 PVALBP20472 110 aaPredicted RBP11.67□□□□□ -0.54
SPTB-205ENST00000542694 VAMP2P63027 116 aa11.67□□□□□ -0.54
SPTB-205ENST00000542694 NRARPQ7Z6K4 114 aa11.67□□□□□ -0.54
SPTB-205ENST00000542694 OR51G1Q8NGK1 321 aa11.67□□□□□ -0.54
SPTB-205ENST00000542694 RNF2Q99496 336 aa11.67□□□□□ -0.54
SPTB-205ENST00000542694 TRAV2A0A0B4J234 112 aa11.66□□□□□ -0.54
SPTB-205ENST00000542694 HNRNPCP07910 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
SPTB-205ENST00000542694 CD7P09564 240 aa11.66□□□□□ -0.54
SPTB-205ENST00000542694 AP2S1P53680 142 aaPredicted RBP11.66□□□□□ -0.54
SPTB-205ENST00000542694 IFITM3Q01628 133 aa11.66□□□□□ -0.54
SPTB-205ENST00000542694 TCF24Q7RTU0 167 aa11.66□□□□□ -0.54
SPTB-205ENST00000542694 OR10P1Q8NGE3 313 aa11.66□□□□□ -0.54
SPTB-205ENST00000542694 TRGV9Q99603 122 aa11.66□□□□□ -0.54
SPTB-205ENST00000542694 MARVELD1Q9BSK0 173 aa11.66□□□□□ -0.54
SPTB-205ENST00000542694 HELTA6NFD8 242 aa11.65□□□□□ -0.54
SPTB-205ENST00000542694 DNASE2O00115 360 aaPredicted RBP11.65□□□□□ -0.54
SPTB-205ENST00000542694 IL4P05112 153 aa11.65□□□□□ -0.54
SPTB-205ENST00000542694 RPL11P62913 178 aaKnown RBP11.65□□□□□ -0.54
SPTB-205ENST00000542694 C11orf87Q6NUJ2 197 aa11.65□□□□□ -0.54
SPTB-205ENST00000542694 ZNF414Q96IQ9 312 aa11.65□□□□□ -0.54
SPTB-205ENST00000542694 ASCL2Q99929 193 aa11.65□□□□□ -0.54
SPTB-205ENST00000542694 RABAC1Q9UI14 185 aa11.65□□□□□ -0.54
SPTB-205ENST00000542694 U3KQK5 164 aa11.65□□□□□ -0.54
SPTB-205ENST00000542694 IGHV3-49A0A0A0MS15 119 aa11.64□□□□□ -0.55
SPTB-205ENST00000542694 FNDC10F2Z333 226 aa11.64□□□□□ -0.55
SPTB-205ENST00000542694 MBPP02686 304 aaPredicted RBP11.64□□□□□ -0.55
SPTB-205ENST00000542694 PSG1P11464 419 aa11.64□□□□□ -0.55
SPTB-205ENST00000542694 CYCSP99999 105 aaKnown RBP11.64□□□□□ -0.55
SPTB-205ENST00000542694 FAM90A2PQ658T7 463 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms