RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 LINC00271P0C7V0 271 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 AREGP15514 252 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 GABRG2P18507 467 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 NTF3P20783 257 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 GATA2P23769 480 aaPredicted RBP4.7□□□□□ -1.66
XRCC4-206ENST00000542685 G6PCP35575 357 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 UQCRFS1P47985 274 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 EMDP50402 254 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 RPL18Q07020 188 aaKnown RBP4.7□□□□□ -1.66
XRCC4-206ENST00000542685 TAL2Q16559 108 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 SGCBQ16585 318 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 ALKBH6Q3KRA9 238 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 DMRTC1Q5HYR2 192 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 LINC01545Q5VT33 79 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 SLC35E4Q6ICL7 350 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 EBLN2Q6P2I7 272 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 ZNF695Q8IW36 515 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 ODF3L1Q8IXM7 274 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 PRR22Q8IZ63 422 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 GJC3Q8NFK1 279 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 OR5D13Q8NGL4 314 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 TMEM190Q8WZ59 177 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 TAF15Q92804 592 aaKnown RBP eCLIP4.7□□□□□ -1.66
XRCC4-206ENST00000542685 DAZLQ92904 295 aaKnown RBP4.7□□□□□ -1.66
XRCC4-206ENST00000542685 CHRNA10Q9GZZ6 450 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 ALKBH4Q9NXW9 302 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 B4GALT7Q9UBV7 327 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 THADAQ6YHU6 1953 aa4.7□□□□□ -1.66
XRCC4-206ENST00000542685 TNRC6AQ8NDV7 1962 aaKnown RBP4.7□□□□□ -1.66
XRCC4-206ENST00000542685 A0A087X0K7 114 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 A0A0A6YYD4 124 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 TEX50A0A1B0GTY4 177 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 PRSS37A4D1T9 235 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 IZUMO1RA6ND01 250 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 SHISA9B4DS77 424 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 E9PLD3 99 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 C11orf98E9PRG8 122 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 F2Z2F3 143 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 SLC31A1O15431 190 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 OR7C1O76099 320 aaPredicted RBP4.69□□□□□ -1.66
XRCC4-206ENST00000542685 APOMO95445 188 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 IGKV1D-16P01601 117 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 CRYAAP02489 173 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 BGLAPP02818 100 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 CA3P07451 260 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 CT62P0C5K7 136 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 C8orf88P0DMB2 117 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 IFITM1P13164 125 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 NDUFV3P56181 108 aaKnown RBP4.69□□□□□ -1.66
XRCC4-206ENST00000542685 TMEM50BP56557 158 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 BRWD1-AS2P59051 145 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 TAS2R45P59539 299 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 HERV-K104P61576 105 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 GNB1P62873 340 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 EFNB3Q15768 340 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 CLEC12BQ2HXU8 276 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 CEACAM16Q2WEN9 425 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 ZNF766Q5HY98 468 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 OTPQ5XKR4 325 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 LCN12Q6JVE5 192 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 Q6P435 159 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 PRSS41Q7RTY9 318 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 TBC1D26Q86UD7 250 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 ATOH7Q8N100 152 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 SPEM1Q8N4L4 309 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 OR51H1Q8NH63 302 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 OR1F12Q8NHA8 337 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 ZNRF2Q8NHG8 242 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 SSC4DQ8WTU2 575 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 PPDPFLQ8WWR9 84 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 RPEQ96AT9 228 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 ARHGAP5-AS1Q96IT6 56 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 C1orf147Q96MC9 270 aaPredicted RBP4.69□□□□□ -1.66
XRCC4-206ENST00000542685 OR4C12Q96R67 309 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 TMEM147Q9BVK8 224 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 C19orf24Q9BVV8 132 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 ULBP3Q9BZM4 244 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 ZNF331Q9NQX6 463 aaPredicted RBP4.69□□□□□ -1.66
XRCC4-206ENST00000542685 LOXL2Q9Y4K0 774 aa4.69□□□□□ -1.66
XRCC4-206ENST00000542685 YTHDF2Q9Y5A9 579 aaKnown RBP4.69□□□□□ -1.66
XRCC4-206ENST00000542685 MPDZO75970 2070 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 IGHV1-24A0A0C4DH33 117 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 A0A1W2PPI3 338 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 SMIM27A0A1W2PRY6 76 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 TEX22C9J3V5 150 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 WNT9BO14905 357 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 PAGE4O60829 102 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 NDUFS7O75251 213 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 CST7O76096 145 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 NDUFB4O95168 129 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 LEPROTL1O95214 131 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 FAM106CPP0CH98 169 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 FGF6P10767 208 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 CCL1P22362 96 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 ACP1P24666 158 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 KIR2DS2P43631 304 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 VDAC2P45880 294 aaPredicted RBP4.68□□□□□ -1.66
XRCC4-206ENST00000542685 CXCL12P48061 93 aa4.68□□□□□ -1.66
XRCC4-206ENST00000542685 RPL27P61353 136 aaKnown RBP4.68□□□□□ -1.66
XRCC4-206ENST00000542685 ERVK11-1P61568 191 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms