RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 SGMS2Q8NHU3 365 aa9.15□□□□□ -0.95
CDH3-203ENST00000542274 HDHD3Q9BSH5 251 aaPredicted RBP9.15□□□□□ -0.95
CDH3-203ENST00000542274 EDA2RQ9HAV5 297 aa9.15□□□□□ -0.95
CDH3-203ENST00000542274 SCRT2Q9NQ03 307 aa9.15□□□□□ -0.95
CDH3-203ENST00000542274 KCNS2Q9ULS6 477 aa9.15□□□□□ -0.95
CDH3-203ENST00000542274 TMEM8BA6NDV4 472 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 OR4C46A6NHA9 309 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 SLC25A33Q9BSK2 321 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 SCNM1Q9BWG6 230 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 LGALS4P56470 323 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 TAS2R46P59540 309 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 TBR1Q16650 682 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 C2orf91Q6ZV80 131 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 LRTM2Q8N967 370 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 OR13A1Q8NGR1 328 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 OR1F12Q8NHA8 337 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 DEFB127Q9H1M4 99 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 PIEZO2Q9H5I5 2752 aa9.14□□□□□ -0.95
CDH3-203ENST00000542274 IGKV1D-8A0A087WSZ0 117 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 TINCRA0A1B0GVN0 87 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 FAM106CPP0CH98 169 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 IFITM1P13164 125 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 SRD5A1P18405 259 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 FAM106AQ4KMX7 169 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 TTC32Q5I0X7 151 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 EBLN2Q6P2I7 272 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 RBPMS2Q6ZRY4 209 aaKnown RBP9.13□□□□□ -0.95
CDH3-203ENST00000542274 C6orf201Q7Z4U5 140 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 OR1L4Q8NGR5 311 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 OR5P3Q8WZ94 311 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 SPTSSAQ969W0 71 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 LINC00477Q96M19 166 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 V9GYY9 64 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 BSNQ9UPA5 3926 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 TRAV1-1A0A0B4J248 108 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 FCN1O00602 326 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 CXorf1O96002 111 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 EGR1P18146 543 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 BLVRBP30043 206 aaPredicted RBP9.13□□□□□ -0.95
CDH3-203ENST00000542274 UBE2G1P62253 170 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 ARFRP1Q13795 201 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 CR1LQ2VPA4 569 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 OR2H1Q9GZK4 316 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 IGF2RP11717 2491 aa9.13□□□□□ -0.95
CDH3-203ENST00000542274 APOMO95445 188 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 G6PCP35575 357 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 FOXI1Q12951 378 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 BPIFA4PQ86YQ2 179 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 TSKUQ8WUA8 353 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 NEIL1Q96FI4 390 aaPredicted RBP9.12□□□□□ -0.95
CDH3-203ENST00000542274 OR10A2Q9H208 303 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 MED12LQ86YW9 2145 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 KLK10O43240 276 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 GFRA3O60609 400 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 MRPL33O75394 65 aaKnown RBP9.12□□□□□ -0.95
CDH3-203ENST00000542274 OR8B3Q8NGG8 313 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 BAALCQ8WXS3 180 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 OR8B2Q96RD0 313 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 PRRG4Q9BZD6 226 aa9.12□□□□□ -0.95
CDH3-203ENST00000542274 LIN7CQ9NUP9 197 aaKnown RBP9.12□□□□□ -0.95
CDH3-203ENST00000542274 KLF13Q9Y2Y9 288 aaPredicted RBP9.12□□□□□ -0.95
CDH3-203ENST00000542274 A0A1W2PRD5 423 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 A0A1W2PRF3 423 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 A0A1W2PRM7 423 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 FAM181BA6NEQ2 426 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 OOEPA6NGQ2 149 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 DNPH1O43598 174 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 COL8A1P27658 744 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 OR10J3Q5JRS4 329 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 PRELID3AQ96N28 172 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 PRR14LQ5THK1 2151 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 IGKV1-12A0A0C4DH73 117 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 IGKV1D-12P01611 117 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 TLE1Q04724 770 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 FBXL14Q8N1E6 418 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 PIGYQ3MUY2 71 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 GATAD1Q8WUU5 269 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 PIGCQ92535 297 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 ZNF488Q96MN9 340 aa9.11□□□□□ -0.95
CDH3-203ENST00000542274 RP1L1Q8IWN7 2480 aaPredicted RBP9.1□□□□□ -0.95
CDH3-203ENST00000542274 EWSR1Q01844 656 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDH3-203ENST00000542274 GAGE2BQ13066 116 aa9.1□□□□□ -0.95
CDH3-203ENST00000542274 GAGE2EQ4V326 116 aa9.1□□□□□ -0.95
CDH3-203ENST00000542274 LINC01587Q99440 93 aa9.1□□□□□ -0.95
CDH3-203ENST00000542274 FAM234AQ9H0X4 552 aa9.1□□□□□ -0.95
CDH3-203ENST00000542274 SIGLEC8Q9NYZ4 499 aa9.1□□□□□ -0.95
CDH3-203ENST00000542274 GAGE2DQ9UEU5 116 aa9.1□□□□□ -0.95
CDH3-203ENST00000542274 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.1□□□□□ -0.95
CDH3-203ENST00000542274 SNURFLB1AK76 121 aa9.1□□□□□ -0.95
CDH3-203ENST00000542274 REG1BP48304 166 aa9.1□□□□□ -0.95
CDH3-203ENST00000542274 SFXN3Q9BWM7 321 aa9.1□□□□□ -0.95
CDH3-203ENST00000542274 A0A0U1RRA0 63 aa9.09□□□□□ -0.95
CDH3-203ENST00000542274 ZNF732B4DXR9 585 aa9.09□□□□□ -0.95
CDH3-203ENST00000542274 NGFP01138 241 aa9.09□□□□□ -0.95
CDH3-203ENST00000542274 RPL35AP18077 110 aaKnown RBP9.09□□□□□ -0.95
CDH3-203ENST00000542274 AMY2BP19961 511 aa9.09□□□□□ -0.95
CDH3-203ENST00000542274 AJUBAQ96IF1 538 aa9.09□□□□□ -0.95
CDH3-203ENST00000542274 HS3ST6Q96QI5 342 aa9.09□□□□□ -0.95
CDH3-203ENST00000542274 PRADC1Q9BSG0 188 aa9.09□□□□□ -0.95
CDH3-203ENST00000542274 SPRR3Q9UBC9 169 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms