RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ASAH2BP0C7U1 165 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 HLA-DMBP28068 263 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 NMUP48645 174 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 TIRAPP58753 221 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 HERV-K104P61576 105 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 GNB1P62873 340 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 HERVK_113P63121 156 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 GNG5P63218 68 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 PLGLB1Q02325 96 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 SRYQ05066 204 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 PRDX1Q06830 199 aaKnown RBP3.52□□□□□ -1.85
SNHG1-219ENST00000542112 GUSBP1Q15486 140 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 FAM120AOSQ5T036 256 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 ZNF841Q6ZN19 808 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 GOLT1AQ6ZVE7 132 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 HSD11B1LQ7Z5J1 315 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 CEND1Q8N111 149 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 FAM19A2Q8N3H0 131 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 RPP25LQ8N5L8 163 aaKnown RBP3.52□□□□□ -1.85
SNHG1-219ENST00000542112 KLHDC9Q8NEP7 349 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 SSC4DQ8WTU2 575 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 RNF138Q8WVD3 245 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 ELSPBP1Q96BH3 223 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 TAS2R4Q9NYW5 299 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 TP53TG1Q9Y2A0 90 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 Q9Y3F1 56 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 MYO7AQ13402 2215 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 TICRRQ7Z2Z1 1910 aa3.52□□□□□ -1.85
SNHG1-219ENST00000542112 NUP214P35658 2090 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-219ENST00000542112 TNRC6AQ8NDV7 1962 aaKnown RBP3.51□□□□□ -1.85
SNHG1-219ENST00000542112 LOC102723996A0A087X1L8 192 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 LOC107986453A0A1B0GWG9 222 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 CST7O76096 145 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 NDUFB4O95168 129 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 IGHMP01871 453 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 HMGN2P05204 90 aaKnown RBP3.51□□□□□ -1.85
SNHG1-219ENST00000542112 GYPBP06028 91 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 LGALS1P09382 135 aaKnown RBP3.51□□□□□ -1.85
SNHG1-219ENST00000542112 NPPCP23582 126 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 PSMB8P28062 276 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 RPL13AP40429 203 aaKnown RBP3.51□□□□□ -1.85
SNHG1-219ENST00000542112 CXCL5P42830 114 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 CLDN17P56750 224 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 RBM11P57052 281 aaKnown RBP3.51□□□□□ -1.85
SNHG1-219ENST00000542112 MZT1Q08AG7 82 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 FHL1Q13642 323 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 FAM53BQ14153 422 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 IZUMO4Q1ZYL8 232 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 VWC2Q2TAL6 325 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 C9orf57Q5W0N0 161 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 GAGE2AQ6NT46 116 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 IL17RELQ6ZVW7 336 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 C6orf201Q7Z4U5 140 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 PRIMA1Q86XR5 153 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 ODF3L1Q8IXM7 274 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 OR2A1Q8NGT9 310 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 IL17DQ8TAD2 202 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 IL1F10Q8WWZ1 152 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 TMEM158Q8WZ71 300 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 ST6GALNAC6Q969X2 333 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 ZNF689Q96CS4 500 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-219ENST00000542112 ZNF501Q96CX3 271 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-219ENST00000542112 C8orf49Q96NF6 230 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 GLIPR2Q9H4G4 154 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 C20orf141Q9NUB4 165 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 RNF186Q9NXI6 227 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 C21orf62Q9NYP8 219 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 TECRQ9NZ01 308 aaKnown RBP3.51□□□□□ -1.85
SNHG1-219ENST00000542112 B9D1Q9UPM9 204 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 PLXNA4Q9HCM2 1894 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 KIF26AQ9ULI4 1882 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-219ENST00000542112 MYOFQ9NZM1 2061 aa3.51□□□□□ -1.85
SNHG1-219ENST00000542112 NOTCH4Q99466 2003 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 TRAV27A0A087WT01 109 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 A0A0A6YYD5 115 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 TCRBV4S1A1TA0A5B7 111 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 HSPB6O14558 160 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 KLK10O43240 276 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 TNFSF12O43508 249 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 SPRY1O43609 319 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-219ENST00000542112 SYNGR2O43760 224 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 NXPH3O95157 252 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 TRACP01848 142 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 RBP4P02753 201 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 IL4P05112 153 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 BCL3P20749 454 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 ZFP36P26651 326 aaKnown RBP3.5□□□□□ -1.85
SNHG1-219ENST00000542112 NCBP2P52298 156 aaKnown RBP eCLIP3.5□□□□□ -1.853e-13■■■□□ 15.3
SNHG1-219ENST00000542112 C12orf74Q32Q52 190 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 C1orf195Q5TG92 126 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 SLC48A1Q6P1K1 146 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 ACP7Q6ZNF0 438 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 TRPT1Q86TN4 253 aaKnown RBP3.5□□□□□ -1.85
SNHG1-219ENST00000542112 PDPNQ86YL7 162 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 RPRMLQ8N4K4 120 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 TMEM86BQ8N661 226 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 ANKRD29Q8N6D5 301 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 PFN4Q8NHR9 129 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 SCAMP5Q8TAC9 235 aa3.5□□□□□ -1.85
SNHG1-219ENST00000542112 IGFBPL1Q8WX77 278 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms