RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 RHPN1-AS1Q9BWJ2 59 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 NUDT15Q9NV35 164 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 CACFD1Q9UGQ2 172 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 SORL1Q92673 2214 aa7.28□□□□□ -1.24
YBX3-212ENST00000542002 TRAV14DV4A0A0A6YYC5 116 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 IGHV3-66A0A0C4DH42 116 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 RBMY1BA6NDE4 496 aaKnown RBP7.27□□□□□ -1.25
YBX3-212ENST00000542002 RBMY1EA6NEQ0 496 aaKnown RBP7.27□□□□□ -1.25
YBX3-212ENST00000542002 FAM90A26D6RGX4 464 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 WRBO00258 174 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 SYNGR2O43760 224 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 UPK1BO75841 260 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 RBMY1DP0C7P1 496 aaKnown RBP7.27□□□□□ -1.25
YBX3-212ENST00000542002 NHLRC4P0CG21 123 aaPredicted RBP7.27□□□□□ -1.25
YBX3-212ENST00000542002 PAX9P55771 341 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 POLR2GP62487 172 aaKnown RBP eCLIP7.27□□□□□ -1.25
YBX3-212ENST00000542002 ASAH1Q13510 395 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 GAMTQ14353 236 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 ZNF846Q147U1 533 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 FAM90A2PQ658T7 463 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 ZNF600Q6ZNG1 722 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 GTSCR1Q86UQ5 136 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 COQ8AQ8NI60 647 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 CITED4Q96RK1 184 aa7.27□□□□□ -1.25
YBX3-212ENST00000542002 IGKV1D-37A0A075B6S9 117 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 TRAV25A0A0B4J276 109 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 PIGBOS1A0A0B4J2F0 54 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 FAM240BA0A1B0GVZ2 78 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 RPS10-NUDT3A0A1W2PQS6 291 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 OR11H12B2RN74 326 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 PRSS46E5RG02 174 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 TSPAN4O14817 238 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 IFNA4P05014 189 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 H2AFB2P0C5Z0 115 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 SLC25A4P12235 298 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 OR10J1P30954 320 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 HAGHQ16775 308 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 RBPMS2Q6ZRY4 209 aaKnown RBP7.26□□□□□ -1.25
YBX3-212ENST00000542002 ST8SIA2Q92186 375 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 ACY3Q96HD9 319 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 WDR12Q9GZL7 423 aaKnown RBP7.26□□□□□ -1.25
YBX3-212ENST00000542002 VSIRQ9H7M9 311 aa7.26□□□□□ -1.25
YBX3-212ENST00000542002 DNAH7Q8WXX0 4024 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 IGKV1OR2-108A0A075B7D4 117 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 PMS2P5A8MQ11 134 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 H3BP45 60 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 CCSO14618 274 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 DFFBO76075 338 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 CRYBB3P26998 211 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 GPX4P36969 197 aaPredicted RBP7.25□□□□□ -1.25
YBX3-212ENST00000542002 ATP5IP56385 69 aaPredicted RBP7.25□□□□□ -1.25
YBX3-212ENST00000542002 YPEL3P61236 119 aaPredicted RBP7.25□□□□□ -1.25
YBX3-212ENST00000542002 ZNF90Q03938 601 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 SLC16A13Q7RTY0 426 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 OR1S2Q8NGQ3 325 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 ZNF431Q8TF32 576 aaPredicted RBP7.25□□□□□ -1.25
YBX3-212ENST00000542002 TM2D3Q9BRN9 247 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 TUBA4BQ9H853 241 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 UBQLN2Q9UHD9 624 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 U3KQE9 123 aa7.25□□□□□ -1.25
YBX3-212ENST00000542002 IGKV3-7A0A075B6H7 116 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 TRAV30A0A087WSZ9 112 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 LOC100996750A0A140TA64 210 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 MED6O75586 246 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 CCNKO75909 580 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 IFNA21P01568 189 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 MBPP02686 304 aaPredicted RBP7.24□□□□□ -1.25
YBX3-212ENST00000542002 PSG1P11464 419 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 NPPCP23582 126 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 NKX2-1P43699 371 aaPredicted RBP7.24□□□□□ -1.25
YBX3-212ENST00000542002 USF2Q15853 346 aaPredicted RBP7.24□□□□□ -1.25
YBX3-212ENST00000542002 IAH1Q2TAA2 248 aaPredicted RBP7.24□□□□□ -1.25
YBX3-212ENST00000542002 ODF3L2Q3SX64 289 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 SPANXN5Q5MJ07 72 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 LCE2CQ5TA81 110 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 ETFRF1Q6IPR1 90 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 MZT2BQ6NZ67 158 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 NRARPQ7Z6K4 114 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 NOXA1Q86UR1 476 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 GBGT1Q8N5D6 347 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 STPG3Q8N7X2 389 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 ZBTB8BQ8NAP8 495 aaPredicted RBP7.24□□□□□ -1.25
YBX3-212ENST00000542002 SPAG8Q99932 426 aaPredicted RBP7.24□□□□□ -1.25
YBX3-212ENST00000542002 KRTAP4-6Q9BYQ5 205 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 SRD5A3Q9H8P0 318 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 GSKIPQ9P0R6 139 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 PAIP2BQ9ULR5 123 aaKnown RBP7.24□□□□□ -1.25
YBX3-212ENST00000542002 U3KQK5 164 aa7.24□□□□□ -1.25
YBX3-212ENST00000542002 SSSCA1O60232 199 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 TOMM40O96008 361 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 RD3LP0DJH9 198 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 TFPI2P48307 235 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 RAB11AP62491 216 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 IL15RAQ13261 267 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 ZNF124Q15973 351 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 LAMTOR1Q6IAA8 161 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 TMEM182Q6ZP80 229 aaPredicted RBP7.23□□□□□ -1.25
YBX3-212ENST00000542002 TCF24Q7RTU0 167 aa7.23□□□□□ -1.25
YBX3-212ENST00000542002 C12orf45Q8N5I9 185 aaPredicted RBP7.23□□□□□ -1.25
YBX3-212ENST00000542002 FAM24BQ8N5W8 94 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms