RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 NPIPB3Q92617 1050 aa7.65□□□□□ -1.18
CNOT4-212ENST00000541284 CACNA1HO95180 2353 aa7.65□□□□□ -1.18
CNOT4-212ENST00000541284 TRAV34A0A0B4J273 112 aa7.65□□□□□ -1.18
CNOT4-212ENST00000541284 IGLC7A0M8Q6 106 aa7.65□□□□□ -1.18
CNOT4-212ENST00000541284 PEX7O00628 323 aa7.65□□□□□ -1.18
CNOT4-212ENST00000541284 ZNF324O75467 553 aaPredicted RBP7.65□□□□□ -1.18
CNOT4-212ENST00000541284 HLA-DQA1P01909 254 aa7.65□□□□□ -1.18
CNOT4-212ENST00000541284 CRYGBP07316 175 aa7.65□□□□□ -1.18
CNOT4-212ENST00000541284 NUP35Q8NFH5 326 aa7.65□□□□□ -1.18
CNOT4-212ENST00000541284 NUDT10Q8NFP7 164 aa7.65□□□□□ -1.18
CNOT4-212ENST00000541284 NUDT11Q96G61 164 aa7.65□□□□□ -1.18
CNOT4-212ENST00000541284 MLST8Q9BVC4 326 aa7.65□□□□□ -1.18
CNOT4-212ENST00000541284 AMMECR1Q9Y4X0 333 aaPredicted RBP7.65□□□□□ -1.18
CNOT4-212ENST00000541284 ANKRD11Q6UB99 2663 aaPredicted RBP7.65□□□□□ -1.18
CNOT4-212ENST00000541284 A0A0G2JNJ9 132 aa7.65□□□□□ -1.19
CNOT4-212ENST00000541284 C3orf79P0CE67 100 aa7.65□□□□□ -1.19
CNOT4-212ENST00000541284 GNG5P63218 68 aa7.65□□□□□ -1.19
CNOT4-212ENST00000541284 Q71RC1 249 aaPredicted RBP7.65□□□□□ -1.19
CNOT4-212ENST00000541284 ASCL5Q7RTU5 278 aa7.65□□□□□ -1.19
CNOT4-212ENST00000541284 PDPNQ86YL7 162 aa7.65□□□□□ -1.19
CNOT4-212ENST00000541284 GAL3ST2Q9H3Q3 398 aa7.65□□□□□ -1.19
CNOT4-212ENST00000541284 Q9UFV3 132 aa7.65□□□□□ -1.19
CNOT4-212ENST00000541284 KLF12Q9Y4X4 402 aa7.65□□□□□ -1.19
CNOT4-212ENST00000541284 PLXNB1O43157 2135 aa7.65□□□□□ -1.19
CNOT4-212ENST00000541284 KLF5Q13887 457 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-212ENST00000541284 TMEM183BQ1AE95 376 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 COX19Q49B96 90 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 SPATA12Q7Z6I5 190 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 FLYWCH2Q96CP2 140 aaKnown RBP7.64□□□□□ -1.19
CNOT4-212ENST00000541284 RNF2Q99496 336 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 FAM103A1Q9BTL3 118 aaKnown RBP7.64□□□□□ -1.19
CNOT4-212ENST00000541284 PAXXQ9BUH6 204 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 MGST1P10620 155 aaKnown RBP7.64□□□□□ -1.19
CNOT4-212ENST00000541284 FAM120AOSQ5T036 256 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 LHFPL4Q7Z7J7 247 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 OR4C13Q8NGP0 309 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 OR2J3O76001 311 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 APOA2P02652 100 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 C10orf113Q5VZT2 155 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 RASL11AQ6T310 242 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 ZNF705AQ6ZN79 300 aaPredicted RBP7.64□□□□□ -1.19
CNOT4-212ENST00000541284 FAM19A2Q8N3H0 131 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 SIGLECL1Q8N7X8 197 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 VAMP8Q9BV40 100 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 SAMD10Q9BYL1 202 aa7.64□□□□□ -1.19
CNOT4-212ENST00000541284 MRPL27Q9P0M9 148 aaKnown RBP7.64□□□□□ -1.19
CNOT4-212ENST00000541284 A0A1W2PN81 502 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 ZNF785A8K8V0 405 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 DIRC3C9JPN6 131 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 GP9P14770 177 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 TNFSF4P23510 183 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 PRRX1P54821 245 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 CASP6P55212 293 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 GRAMD2BQ96HH9 432 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 TMEM208Q9BTX3 173 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 NKX6-3A6NJ46 265 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 ZNF253O75346 499 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 APCSP02743 223 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 G0S2P27469 103 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 AMTP48728 403 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 KRTDAPP60985 99 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 ERHP84090 104 aaKnown RBP7.63□□□□□ -1.19
CNOT4-212ENST00000541284 BSPH1Q075Z2 132 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 TMEM155Q4W5P6 130 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 ALKBH7Q9BT30 221 aaPredicted RBP7.63□□□□□ -1.19
CNOT4-212ENST00000541284 PRSS22Q9GZN4 317 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 LPAR2Q9HBW0 351 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 COX7A2P2O60397 106 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 PLAUP00749 431 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 TBR1Q16650 682 aa7.63□□□□□ -1.19
CNOT4-212ENST00000541284 C19orf71A6NCJ1 209 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 M0QZK8 103 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 MOSP00540 346 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 IGLC2P0DOY2 106 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 IGLC3P0DOY3 106 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 PMCHP20382 165 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 CNTFRP26992 372 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 PAX2Q02962 417 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 TNXAQ16473 311 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 MAJINQ3KP22 176 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 EBLN2Q6P2I7 272 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 LINC00305Q7Z4B0 112 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 OR4B1Q8NGF8 309 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 TMEM186Q96B77 213 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 WASHC3Q9Y3C0 194 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 SLC25A17O43808 307 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 RPLP1P05386 114 aaKnown RBP7.62□□□□□ -1.19
CNOT4-212ENST00000541284 DLX1P56177 255 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 SELENOVP59797 346 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 KIR3DL3Q8N743 410 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 OR1L4Q8NGR5 311 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 GTSF1Q8WW33 167 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 ZNF586Q9NXT0 402 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 KAAG1Q9UBP8 84 aa7.62□□□□□ -1.19
CNOT4-212ENST00000541284 PPIAL4EA0A075B759 164 aa7.61□□□□□ -1.19
CNOT4-212ENST00000541284 C2orf70A6NJV1 201 aa7.61□□□□□ -1.19
CNOT4-212ENST00000541284 PPIAL4DF5H284 164 aa7.61□□□□□ -1.19
CNOT4-212ENST00000541284 HYPMO75409 117 aa7.61□□□□□ -1.19
CNOT4-212ENST00000541284 NPSP0C0P6 89 aa7.61□□□□□ -1.19
CNOT4-212ENST00000541284 PPIAL4FP0DN26 164 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms