RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SELENOKQ9Y6D0 94 aa9.81□□□□□ -0.84
LTBR-208ENST00000541005 OR11H12B2RN74 326 aa9.8□□□□□ -0.84
LTBR-208ENST00000541005 SYNGR2O43760 224 aa9.8□□□□□ -0.84
LTBR-208ENST00000541005 ADAP1O75689 374 aa9.8□□□□□ -0.84
LTBR-208ENST00000541005 CD5P06127 495 aa9.8□□□□□ -0.84
LTBR-208ENST00000541005 OR10J1P30954 320 aa9.8□□□□□ -0.84
LTBR-208ENST00000541005 GPX4P36969 197 aaPredicted RBP9.8□□□□□ -0.84
LTBR-208ENST00000541005 YPEL3P61236 119 aaPredicted RBP9.8□□□□□ -0.84
LTBR-208ENST00000541005 TIGITQ495A1 244 aa9.8□□□□□ -0.84
LTBR-208ENST00000541005 FAM90A2PQ658T7 463 aa9.8□□□□□ -0.84
LTBR-208ENST00000541005 RNF2Q99496 336 aa9.8□□□□□ -0.84
LTBR-208ENST00000541005 FAM110AQ9BQ89 295 aa9.8□□□□□ -0.84
LTBR-208ENST00000541005 WFDC10AQ9H1F0 79 aa9.8□□□□□ -0.84
LTBR-208ENST00000541005 TUBA4BQ9H853 241 aa9.8□□□□□ -0.84
LTBR-208ENST00000541005 NUDT15Q9NV35 164 aa9.8□□□□□ -0.84
LTBR-208ENST00000541005 MPTX1A8MV57 137 aa9.79□□□□□ -0.84
LTBR-208ENST00000541005 UPK1BO75841 260 aa9.79□□□□□ -0.84
LTBR-208ENST00000541005 IFNA21P01568 189 aa9.79□□□□□ -0.84
LTBR-208ENST00000541005 ID3Q02535 119 aa9.79□□□□□ -0.84
LTBR-208ENST00000541005 ZNF846Q147U1 533 aa9.79□□□□□ -0.84
LTBR-208ENST00000541005 OR4D5Q8NGN0 318 aa9.79□□□□□ -0.84
LTBR-208ENST00000541005 WWC2-AS2Q96NR7 200 aa9.79□□□□□ -0.84
LTBR-208ENST00000541005 RBMY1BA6NDE4 496 aaKnown RBP9.78□□□□□ -0.84
LTBR-208ENST00000541005 RBMY1EA6NEQ0 496 aaKnown RBP9.78□□□□□ -0.84
LTBR-208ENST00000541005 OR4C46A6NHA9 309 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 PRSS46E5RG02 174 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 IFNA4P05014 189 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 RBMY1DP0C7P1 496 aaKnown RBP9.78□□□□□ -0.84
LTBR-208ENST00000541005 IAPPP10997 89 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 CRYBB3P26998 211 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 RAB11AP62491 216 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 RPP30P78346 268 aaKnown RBP9.78□□□□□ -0.84
LTBR-208ENST00000541005 HAGHQ16775 308 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 MZT2BQ6NZ67 158 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 DEFB125Q8N687 156 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 ST8SIA2Q92186 375 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 NPIPB3Q92617 1050 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 ACY3Q96HD9 319 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 METTL26Q96S19 204 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 MAGT1Q9H0U3 335 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 TMEM231Q9H6L2 316 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 ZMAT4Q9H898 229 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 SRD5A3Q9H8P0 318 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 HUWE1Q7Z6Z7 4374 aaKnown RBP9.78□□□□□ -0.84
LTBR-208ENST00000541005 AGRNO00468 2067 aa9.78□□□□□ -0.84
LTBR-208ENST00000541005 TRAV6A0A075B6T7 132 aa9.77□□□□□ -0.85
LTBR-208ENST00000541005 IGHV3-49A0A0A0MS15 119 aa9.77□□□□□ -0.85
LTBR-208ENST00000541005 FAM240BA0A1B0GVZ2 78 aa9.77□□□□□ -0.85
LTBR-208ENST00000541005 TOMM40O96008 361 aa9.77□□□□□ -0.85
LTBR-208ENST00000541005 APOHP02749 345 aaPredicted RBP9.77□□□□□ -0.85
LTBR-208ENST00000541005 NPPCP23582 126 aa9.77□□□□□ -0.85
LTBR-208ENST00000541005 NKX2-1P43699 371 aaPredicted RBP9.77□□□□□ -0.85
LTBR-208ENST00000541005 ODF3L2Q3SX64 289 aa9.77□□□□□ -0.85
LTBR-208ENST00000541005 ZNF431Q8TF32 576 aaPredicted RBP9.77□□□□□ -0.85
LTBR-208ENST00000541005 SLC35E1Q96K37 410 aa9.77□□□□□ -0.85
LTBR-208ENST00000541005 RCHY1Q96PM5 261 aa9.77□□□□□ -0.85
LTBR-208ENST00000541005 U3KQE9 123 aa9.77□□□□□ -0.85
LTBR-208ENST00000541005 NBEAL2Q6ZNJ1 2754 aa9.77□□□□□ -0.85
LTBR-208ENST00000541005 TRAV2A0A0B4J234 112 aa9.76□□□□□ -0.85
LTBR-208ENST00000541005 A0A1W2PS18 150 aa9.76□□□□□ -0.85
LTBR-208ENST00000541005 H2AFB2P0C5Z0 115 aa9.76□□□□□ -0.85
LTBR-208ENST00000541005 GAMTQ14353 236 aa9.76□□□□□ -0.85
LTBR-208ENST00000541005 IAH1Q2TAA2 248 aaPredicted RBP9.76□□□□□ -0.85
LTBR-208ENST00000541005 TCF24Q7RTU0 167 aa9.76□□□□□ -0.85
LTBR-208ENST00000541005 LILRB2Q8N423 598 aa9.76□□□□□ -0.85
LTBR-208ENST00000541005 ZBTB8BQ8NAP8 495 aaPredicted RBP9.76□□□□□ -0.85
LTBR-208ENST00000541005 Q8WTZ3 238 aa9.76□□□□□ -0.85
LTBR-208ENST00000541005 SPATA25Q9BR10 227 aa9.76□□□□□ -0.85
LTBR-208ENST00000541005 IGKV1D-37A0A075B6S9 117 aa9.75□□□□□ -0.85
LTBR-208ENST00000541005 IGHV3OR16-13A0A075B7E8 117 aa9.75□□□□□ -0.85
LTBR-208ENST00000541005 IGHV3-74A0A0B4J1X5 117 aa9.75□□□□□ -0.85
LTBR-208ENST00000541005 WRBO00258 174 aa9.75□□□□□ -0.85
LTBR-208ENST00000541005 RD3LP0DJH9 198 aa9.75□□□□□ -0.85
LTBR-208ENST00000541005 POLR2GP62487 172 aaKnown RBP eCLIP9.75□□□□□ -0.85
LTBR-208ENST00000541005 IFITM3Q01628 133 aa9.75□□□□□ -0.85
LTBR-208ENST00000541005 THAP8Q8NA92 274 aa9.75□□□□□ -0.85
LTBR-208ENST00000541005 SMIM8Q96KF7 97 aa9.75□□□□□ -0.85
LTBR-208ENST00000541005 CITED4Q96RK1 184 aa9.75□□□□□ -0.85
LTBR-208ENST00000541005 SEC22CQ9BRL7 303 aa9.75□□□□□ -0.85
LTBR-208ENST00000541005 STRAPQ9Y3F4 350 aaKnown RBP9.75□□□□□ -0.85
LTBR-208ENST00000541005 SSSCA1O60232 199 aa9.74□□□□□ -0.85
LTBR-208ENST00000541005 DFFBO76075 338 aa9.74□□□□□ -0.85
LTBR-208ENST00000541005 IL4P05112 153 aa9.74□□□□□ -0.85
LTBR-208ENST00000541005 IL5P05113 134 aa9.74□□□□□ -0.85
LTBR-208ENST00000541005 HNRNPCP07910 306 aaKnown RBP eCLIP9.74□□□□□ -0.85
LTBR-208ENST00000541005 PSG1P11464 419 aa9.74□□□□□ -0.85
LTBR-208ENST00000541005 P2RY1P47900 373 aa9.74□□□□□ -0.85
LTBR-208ENST00000541005 CMC4P56277 68 aaPredicted RBP9.74□□□□□ -0.85
LTBR-208ENST00000541005 TAS2R30P59541 319 aa9.74□□□□□ -0.85
LTBR-208ENST00000541005 USF2Q15853 346 aaPredicted RBP9.74□□□□□ -0.85
LTBR-208ENST00000541005 SPANXN5Q5MJ07 72 aa9.74□□□□□ -0.85
LTBR-208ENST00000541005 OR51G1Q8NGK1 321 aa9.74□□□□□ -0.85
LTBR-208ENST00000541005 NARS2Q96I59 477 aaKnown RBP9.74□□□□□ -0.85
LTBR-208ENST00000541005 RAB40CQ96S21 281 aa9.74□□□□□ -0.85
LTBR-208ENST00000541005 TRGV9Q99603 122 aa9.74□□□□□ -0.85
LTBR-208ENST00000541005 GGTLC1Q9BX51 225 aa9.74□□□□□ -0.85
LTBR-208ENST00000541005 RCL1Q9Y2P8 373 aaKnown RBP9.74□□□□□ -0.85
LTBR-208ENST00000541005 IGKV1OR2-108A0A075B7D4 117 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 IGHV3-66A0A0C4DH42 116 aa9.73□□□□□ -0.85
LTBR-208ENST00000541005 ZFP92A6NM28 416 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms