RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ARHGAP32A7KAX9 2087 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 MAP1AP78559 2803 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 MALRD1Q5VYJ5 2156 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 TRAV8-1A0A0A6YYK1 113 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 KLF3P57682 345 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 FOXE3Q13461 319 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 ZNF474Q6S9Z5 364 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 URB1-AS1Q96HZ7 61 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 OR8B2Q96RD0 313 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 UQCR10Q9UDW1 63 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 ZFP30Q9Y2G7 519 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 PTPRZ1P23471 2315 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 hDV102S1A0JD36 115 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 COX7A2P2O60397 106 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 TSPOP30536 169 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 CD69Q07108 199 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 OR10J3Q5JRS4 329 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 WDR73Q6P4I2 378 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 PPP1R35Q8TAP8 253 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 TNFRSF19Q9NS68 423 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 PROCRQ9UNN8 238 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 TLN1Q9Y490 2541 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 PSMB11A5LHX3 300 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 IZUMO1RA6ND01 250 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 CGB1A6NKQ9 187 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 FAM27E3Q08E93 113 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 STUMQ69YW2 141 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 ZNF329Q86UD4 541 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 PAXXQ9BUH6 204 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 PRO3102Q9H379 93 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 SLC25A10Q9UBX3 287 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 ZNF292O60281 2723 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 TRAV9-1A0A075B6T8 112 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 PEX7O00628 323 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 HLA-DQA1P01909 254 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 SFTPCP11686 197 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 MBD6Q96DN6 1003 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 PRNDQ9UKY0 176 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 ZFHX3Q15911 3703 aa8.37□□□□□ -1.07
CDC42SE1-207ENST00000540998 PRR33A8MZF0 331 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 LHBP01229 141 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 IGHV1-46P01743 117 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 PTTG1IPP53801 180 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 TNFAIP6P98066 277 aaPredicted RBP8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 GAGE1Q13065 139 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 PGLYRP4Q96LB8 373 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 COMMD5Q9GZQ3 224 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 RNF24Q9Y225 148 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 LY96Q9Y6Y9 160 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 AKAP6Q13023 2319 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 COL12A1Q99715 3063 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 CUL9Q8IWT3 2517 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 TRBV9A0A0B4J1U6 114 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 SNAI2O43623 268 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 MT-ND6P03923 174 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 KIR2DS2P43631 304 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 CR1LQ2VPA4 569 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 DEFB109BQ30KR1 87 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 LINC00305Q7Z4B0 112 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 OR1B1Q8NGR6 318 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 H1FXQ92522 213 aaKnown RBP8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 SAP30LQ9HAJ7 183 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 CELSR1Q9NYQ6 3014 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 IGKV1D-37A0A075B6S9 117 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 IGHG3P01860 377 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 CSN3P07498 182 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 CA7P43166 264 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 TAS2R45P59539 299 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 RTL8BQ17RB0 113 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 C10orf113Q5VZT2 155 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 PLSCR4Q9NRQ2 329 aa8.36□□□□□ -1.07
CDC42SE1-207ENST00000540998 A0A1W2PRD5 423 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 A0A1W2PRF3 423 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 A0A1W2PRM7 423 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 SLC25A17O43808 307 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 SLC25A5P05141 298 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 FAM87AP0C7U9 286 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 SELENOVP59797 346 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 TBR1Q16650 682 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 ALKBH7Q9BT30 221 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 SPAARA0A1B0GVQ0 90 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 A0A1W2PRE2 83 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 PGPA6NDG6 321 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 C22orf46C9J442 243 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 CNTFRP26992 372 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 CEACAM8P31997 349 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 GTSF1Q8WW33 167 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 FXYD5Q96DB9 178 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 ZNF430Q9H8G1 570 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 CHODLQ9H9P2 273 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 RNF7Q9UBF6 113 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 SH3BGRL2Q9UJC5 107 aa8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 RPUSD1Q9UJJ7 312 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-207ENST00000540998 C20orf202A1L168 122 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 C2orf70A6NJV1 201 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 C2orf83Q53S99 150 aa8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 SLC25A48Q6ZT89 311 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 LOC102724200A0A096LPH7 203 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE1-207ENST00000540998 C19orf67A6NJJ6 358 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms