RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 OR2H1Q9GZK4 316 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 TMEM133Q9H2Q1 129 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 ZNF442Q9H7R0 627 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 PRTFDC1Q9NRG1 225 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 ASF1BQ9NVP2 202 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 ZNF586Q9NXT0 402 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 ANXA10Q9UJ72 324 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 POLR1DQ9Y2S0 133 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 ORC6Q9Y5N6 252 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 ZFC3H1O60293 1989 aaKnown RBP3.05□□□□□ -1.92
YBX3-210ENST00000540975 SBF2Q86WG5 1849 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 ROBO1Q9Y6N7 1651 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 EEF1E1-BLOC1S5C9J1V9 151 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 H7C1C5 153 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 M0R1B8 84 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 GABRPO00591 440 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 EEF1E1O43324 174 aaKnown RBP3.04□□□□□ -1.92
YBX3-210ENST00000540975 DHRS3O75911 302 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 IL3P08700 152 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 NFYAP23511 347 aaPredicted RBP3.04□□□□□ -1.92
YBX3-210ENST00000540975 UBE2E1P51965 193 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 ZNF140P52738 457 aaPredicted RBP3.04□□□□□ -1.92
YBX3-210ENST00000540975 LCN6P62502 163 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 GRB2P62993 217 aaKnown RBP3.04□□□□□ -1.92
YBX3-210ENST00000540975 FABP5Q01469 135 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 CCL15Q16663 113 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 CLEC12BQ2HXU8 276 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 RASL11AQ6T310 242 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 OOSP2Q86WS3 158 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 C20orf196Q8IYI0 205 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 TMEM229BQ8NBD8 167 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 OR5AR1Q8NGP9 310 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 OR1L1Q8NH94 360 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 MFSD8Q8NHS3 518 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 RXFP2Q8WXD0 754 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 POP5Q969H6 163 aaKnown RBP3.04□□□□□ -1.92
YBX3-210ENST00000540975 UBE2E2Q96LR5 201 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 DERL3Q96Q80 235 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 ZNF471Q9BX82 626 aaPredicted RBP3.04□□□□□ -1.92
YBX3-210ENST00000540975 SAMD10Q9BYL1 202 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 SLC25A31Q9H0C2 315 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 TMEM222Q9H0R3 208 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 REEP1Q9H902 201 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 CA10Q9NS85 328 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 TMEM100Q9NV29 134 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 TXNL4BQ9NX01 149 aaKnown RBP3.04□□□□□ -1.92
YBX3-210ENST00000540975 BET1LQ9NYM9 111 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 TAS2R5Q9NYW4 299 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 COMMD9Q9P000 198 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 CYSLTR1Q9Y271 337 aa3.04□□□□□ -1.92
YBX3-210ENST00000540975 COL5A3P25940 1745 aaPredicted RBP3.04□□□□□ -1.92
YBX3-210ENST00000540975 ZNF638Q14966 1978 aaKnown RBP3.03□□□□□ -1.92
YBX3-210ENST00000540975 STRCQ7RTU9 1775 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 WDR90Q96KV7 1748 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 A0A0D9SG52 128 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 IGHV1-69-2A0A0G2JMI3 117 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 LOC285095A0A1B0GVY8 99 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 hADV38S2A0JD32 116 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 TMEM212A6NML5 194 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 K7EPK0 472 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 K7EQS6 105 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 IL5P05113 134 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 HLA-DQB2P05538 268 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 SOD3P08294 240 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 CD14P08571 375 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 SCTP09683 121 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 OR5AL1P0C617 328 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 IGLC1P0CG04 106 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 FABP4P15090 132 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 ARL2P36404 184 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 SUB1P53999 127 aaKnown RBP eCLIP3.03□□□□□ -1.92
YBX3-210ENST00000540975 FBXW4P57775 412 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 UBE2NP61088 152 aaKnown RBP3.03□□□□□ -1.92
YBX3-210ENST00000540975 SP4Q02446 784 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 ZNF345Q14585 488 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 SPANXN3Q5MJ09 141 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 ZNF684Q5T5D7 378 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 HRCT1Q6UXD1 115 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 HEPN1Q6WQI6 88 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 GAPTQ8N292 157 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 TMEM86AQ8N2M4 240 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 KCNRGQ8N5I3 272 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 COX18Q8N8Q8 333 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 OR11H6Q8NGC7 330 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 TMEM54Q969K7 222 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 TMEM106AQ96A25 262 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 PLEKHB2Q96CS7 222 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 SLAMF6Q96DU3 332 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 CIB3Q96Q77 187 aaPredicted RBP3.03□□□□□ -1.92
YBX3-210ENST00000540975 HIST1H2BLQ99880 126 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 NAA38Q9BRA0 125 aaKnown RBP3.03□□□□□ -1.92
YBX3-210ENST00000540975 PRADC1Q9BSG0 188 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 ULBP3Q9BZM4 244 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 CACFD1Q9UGQ2 172 aa3.03□□□□□ -1.92
YBX3-210ENST00000540975 SOX21Q9Y651 276 aaPredicted RBP3.03□□□□□ -1.92
YBX3-210ENST00000540975 SCN9AQ15858 1988 aa3.02□□□□□ -1.93
YBX3-210ENST00000540975 LOXHD1Q8IVV2 1947 aa3.02□□□□□ -1.93
YBX3-210ENST00000540975 TMED7-TICAM2A0A0A6YYA0 188 aa3.02□□□□□ -1.93
YBX3-210ENST00000540975 TRAV14DV4A0A0A6YYC5 116 aa3.02□□□□□ -1.93
YBX3-210ENST00000540975 FAM240AA0A1B0GVK7 77 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms