RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 SYNGR2O43760 224 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 IGKV1-17P01599 117 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 CD7P09564 240 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 OR10J1P30954 320 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 ATP5IP56385 69 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-215ENST00000540904 POLR2GP62487 172 aaKnown RBP eCLIP6.94□□□□□ -1.3
SNHG1-215ENST00000540904 RAB11AP62491 216 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 IFITM3Q01628 133 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 IAH1Q2TAA2 248 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-215ENST00000540904 TIGITQ495A1 244 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 SLC16A13Q7RTY0 426 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 TMEM116Q8NCL8 245 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 ENKURQ8TC29 256 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 ZNF431Q8TF32 576 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-215ENST00000540904 NPIPB3Q92617 1050 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 CIB3Q96Q77 187 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-215ENST00000540904 NEURL2Q9BR09 285 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 GINS3Q9BRX5 216 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 RHPN1-AS1Q9BWJ2 59 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 KRTAP4-6Q9BYQ5 205 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 TUBA4BQ9H853 241 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 GSKIPQ9P0R6 139 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 SMPXQ9UHP9 88 aa6.94□□□□□ -1.3
SNHG1-215ENST00000540904 IGHV3OR16-13A0A075B7E8 117 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 IGHV3-74A0A0B4J1X5 117 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 TRAV25A0A0B4J276 109 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 IGHV7-4-1A0A0J9YVY3 117 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 H3BP45 60 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 CHEK1O14757 476 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 SCGB1D2O95969 90 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 IGLC1P0CG04 106 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 NKX2-1P43699 371 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-215ENST00000540904 RPP30P78346 268 aaKnown RBP6.93□□□□□ -1.3
SNHG1-215ENST00000540904 ID3Q02535 119 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 SPANXN5Q5MJ07 72 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 LAMTOR1Q6IAA8 161 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 SBSPONQ8IVN8 264 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 OR4D5Q8NGN0 318 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 OR1S2Q8NGQ3 325 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 RNF2Q99496 336 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 WFDC10AQ9H1F0 79 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 ZFAND3Q9H8U3 227 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 SORL1Q92673 2214 aa6.93□□□□□ -1.3
SNHG1-215ENST00000540904 TGP01266 2768 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 IGKV3-7A0A075B6H7 116 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 IGHV3-66A0A0C4DH42 116 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 FAM25EA8MYX2 175 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 OR11H12B2RN74 326 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 CCSO14618 274 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 TSPAN4O14817 238 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 SSSCA1O60232 199 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 APOHP02749 345 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-215ENST00000540904 NHLRC4P0CG21 123 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-215ENST00000540904 NPPCP23582 126 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 BMI1P35226 326 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 GPX4P36969 197 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-215ENST00000540904 DEFB125Q8N687 156 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 ZBTB8BQ8NAP8 495 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-215ENST00000540904 Q8WTZ3 238 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 SLC35E1Q96K37 410 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 METTL26Q96S19 204 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 SPAG8Q99932 426 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-215ENST00000540904 C19orf73Q9NVV2 129 aa6.92□□□□□ -1.3
SNHG1-215ENST00000540904 STRAPQ9Y3F4 350 aaKnown RBP6.92□□□□□ -1.3
SNHG1-215ENST00000540904 PRKDCP78527 4128 aaKnown RBP6.92□□□□□ -1.3
SNHG1-215ENST00000540904 C5orf51A6NDU8 294 aa6.91□□□□□ -1.3
SNHG1-215ENST00000540904 ZFP92A6NM28 416 aa6.91□□□□□ -1.3
SNHG1-215ENST00000540904 A8MZ25 164 aa6.91□□□□□ -1.3
SNHG1-215ENST00000540904 RD3LP0DJH9 198 aa6.91□□□□□ -1.3
SNHG1-215ENST00000540904 TFPI2P48307 235 aa6.91□□□□□ -1.3
SNHG1-215ENST00000540904 DEFA1P59665 94 aa6.91□□□□□ -1.3
SNHG1-215ENST00000540904 DEFA3P59666 94 aa6.91□□□□□ -1.3
SNHG1-215ENST00000540904 YPEL3P61236 119 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-215ENST00000540904 RPL11P62913 178 aaKnown RBP6.91□□□□□ -1.3
SNHG1-215ENST00000540904 GAMTQ14353 236 aa6.91□□□□□ -1.3
SNHG1-215ENST00000540904 NRARPQ7Z6K4 114 aa6.91□□□□□ -1.3
SNHG1-215ENST00000540904 C12orf45Q8N5I9 185 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-215ENST00000540904 ST8SIA2Q92186 375 aa6.91□□□□□ -1.3
SNHG1-215ENST00000540904 SRD5A3Q9H8P0 318 aa6.91□□□□□ -1.3
SNHG1-215ENST00000540904 PSENENQ9NZ42 101 aa6.91□□□□□ -1.3
SNHG1-215ENST00000540904 OR4C46A6NHA9 309 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 DFFBO76075 338 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 TOMM40O96008 361 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 MBPP02686 304 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-215ENST00000540904 IL4P05112 153 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 IL5P05113 134 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 PSG1P11464 419 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 CRYBB3P26998 211 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 ZNF90Q03938 601 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 LINC01559Q495D7 138 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 OR8G2PQ6IF36 304 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 TCF24Q7RTU0 167 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 LILRB2Q8N423 598 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 GBGT1Q8N5D6 347 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 NARS2Q96I59 477 aaKnown RBP6.9□□□□□ -1.3
SNHG1-215ENST00000540904 SMIM8Q96KF7 97 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 RAB40CQ96S21 281 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 TMEM231Q9H6L2 316 aa6.9□□□□□ -1.3
SNHG1-215ENST00000540904 VSIRQ9H7M9 311 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms