RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CTXN2P0C2S0 81 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 MED14OSP0DP75 135 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 HRH1P35367 487 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 TAS2R46P59540 309 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 WT1-ASQ06250 92 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 PPP1R1AQ13522 171 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 ZNF124Q15973 351 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 SPSB3Q6PJ21 355 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 LINC00336Q6ZUF6 198 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 ACOT7LQ6ZUV0 252 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 SSX9Q7RTT3 188 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 HOGA1Q86XE5 327 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 APRG1Q8IVJ8 170 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 ARRDC1Q8N5I2 433 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 KCNRGQ8N5I3 272 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 C11orf45Q8TAV5 145 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 MARCH1Q8TCQ1 289 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 CD300LFQ8TDQ1 290 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 MITD1Q8WV92 249 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 TCTEX1D2Q8WW35 142 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 BSCL2Q96G97 398 aaPredicted RBP5.33□□□□□ -1.56
YBX3-209ENST00000540747 GPHA2Q96T91 129 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 RARRES2Q99969 163 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 CSTL1Q9H114 145 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 SHPKQ9UHJ6 478 aa5.33□□□□□ -1.56
YBX3-209ENST00000540747 DNAH5Q8TE73 4624 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 TRAV14DV4A0A0A6YYC5 116 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 OR2T8A6NH00 312 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 C15orf62A8K5M9 175 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 MPTX1A8MV57 137 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 K7EIM0 57 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 UPK2O00526 184 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 CCSO14618 274 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 BCL2L11O43521 198 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 SFT2D2O95562 160 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 NMBP08949 121 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 GIG44P09565 113 aaPredicted RBP5.32□□□□□ -1.56
YBX3-209ENST00000540747 DEFA4P12838 97 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 PGAM2P15259 253 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 FAM90A2PQ658T7 463 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 HSD17B13Q7Z5P4 300 aaPredicted RBP5.32□□□□□ -1.56
YBX3-209ENST00000540747 Q8NAQ8 132 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 OR10W1Q8NGF6 305 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 OR11H2Q8NH07 326 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 OR5B3Q8NH48 314 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 C2CD4CQ8TF44 421 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 ST8SIA2Q92186 375 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 OR10C1Q96KK4 312 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 RNF2Q99496 336 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 ZNF471Q9BX82 626 aaPredicted RBP5.32□□□□□ -1.56
YBX3-209ENST00000540747 QTRT1Q9BXR0 403 aaKnown RBP5.32□□□□□ -1.56
YBX3-209ENST00000540747 KRTAP4-5Q9BYR2 181 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 HRH4Q9H3N8 390 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 FBXL17Q9UF56 701 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 SMPXQ9UHP9 88 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 ANAPC10Q9UM13 185 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 TNFSF18Q9UNG2 199 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 GPR132Q9UNW8 380 aa5.32□□□□□ -1.56
YBX3-209ENST00000540747 C14orf166Q9Y224 244 aaKnown RBP5.32□□□□□ -1.56
YBX3-209ENST00000540747 IGHV3OR16-8A0A075B7F1 116 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 CHEK1O14757 476 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 RTL8CO15255 209 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 IFNA4P05014 189 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 SERPINE2P07093 398 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 CTSGP08311 255 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 EIF5AP63241 154 aaKnown RBP5.31□□□□□ -1.56
YBX3-209ENST00000540747 ZNF345Q14585 488 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 LRRC37A5PQ49AS3 106 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 TMEM128Q5BJH2 165 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 SPAG16Q8N0X2 631 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 PPP1R1CQ8WVI7 109 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 ARPC5LQ9BPX5 153 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 NMES1Q9C002 83 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 CCL28Q9NRJ3 127 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 NDUFA4L2Q9NRX3 87 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 TMEM140Q9NV12 185 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 C21orf62Q9NYP8 219 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 EHFQ9NZC4 300 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 THYN1Q9P016 225 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 ANXA10Q9UJ72 324 aa5.31□□□□□ -1.56
YBX3-209ENST00000540747 F11RQ9Y624 299 aaKnown RBP5.31□□□□□ -1.56
YBX3-209ENST00000540747 IGHV7-4-1A0A0J9YVY3 117 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 C11orf94C9JXX5 98 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 TEX46H3BTG2 121 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 DEFB4AO15263 64 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 ZNF207O43670 478 aaKnown RBP5.3□□□□□ -1.56
YBX3-209ENST00000540747 HPRT1P00492 218 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 IFNA21P01568 189 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 RLN2P04090 185 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 RBMY1A1P0DJD3 496 aaKnown RBP5.3□□□□□ -1.56
YBX3-209ENST00000540747 RBMY1CP0DJD4 496 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 NQO2P16083 231 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 SMCO1Q147U7 214 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 RBMY1FQ15415 496 aaKnown RBP5.3□□□□□ -1.56
YBX3-209ENST00000540747 SURF2Q15527 256 aaPredicted RBP5.3□□□□□ -1.56
YBX3-209ENST00000540747 EIF4E3Q8N5X7 224 aaKnown RBP5.3□□□□□ -1.56
YBX3-209ENST00000540747 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.3□□□□□ -1.56
YBX3-209ENST00000540747 ZBTB34Q8NCN2 500 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 OR5AP2Q8NGF4 316 aa5.3□□□□□ -1.56
YBX3-209ENST00000540747 PHYHIPLQ96FC7 376 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms